Akkermansia muciniphila EB-AMDK-28 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Akkermansia muciniphila EB-AMDK-28 RM systems
Ref: Nam,Y.-D. et al. unpublished
REBASE ref # 24816
Complete sequence: 2,734,254 bp
GenBank #: CP027004
REBASE acronym: Amu28
Org_num: 38575
All begin C5N97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 675 | transcriptional regulator | |||
| 680 | M | M.Amu27ORF680P (100% identity) | M.Amu28ORF680P | |
| 685 | S | S.Amu27ORF680P (100% identity) | S.Amu28ORF680P | |
| 690 | R | Amu27ORF680P (100% identity) | Amu28ORF680P | |
| 695 | DUF488 domain-containing protein | |||
| 5020 | 223 aa hypothetical protein | |||
| 5025 | M | M.AmuNB28ORFBP (100% identity) | M.Amu28ORF5025P | |
| 5030 | S | S.Amu27ORF5055P (100% identity) | S.Amu28ORF5025P | |
| 5035 | anticodon nuclease | |||
| 5040 | R | AmuNB28ORFBP (100% identity) | Amu28ORF5025P | |
| 5045 | 489 aa hypothetical protein | |||
| 9565 | translation initiation factor IF-3 | |||
| 9570 | R | AmuNB28ORFDP (100% identity) | Amu28ORF9575P | |
| 9575 | M | M.AmuNB28ORFDP (100% identity) | M.Amu28ORF9575P | |
| 9580 | S | S1.Amu6ORF2335P (100% identity) | S1.Amu28ORF9575P | |
| 9585 | integrase | |||
| 9590 | S | S2.AmuAMDK2ORF9345P (100% identity) | S2.Amu28ORF9575P | |
| 9595 | S | S1.AmuNB28ORFDP (88% identity) | S3.Amu28ORF9575P | |
| 9600 | 409 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1870 | 258 aa hypothetical protein | |||
| 1875 | M | M.Aph2021aORFAP (92% identity) | M.Amu28ORF1875P | |
| 1880 | 123 aa hypothetical protein | |||
| 1935 | 352 aa hypothetical protein | |||
| 1940 | M | M.Amu27ORF1940P (100% identity) | M.Amu28ORF1940P | |
| 1945 | V | V.Gme92ORFAP (100% identity) | V.Amu28ORF1940P | |
| 1950 | YHYH domain-containing protein | |||
| 4785 | 88 aa hypothetical protein | |||
| 4790 | R | Amu27ORF4815P (100% identity) | Amu28ORF4790P | |
| 4795 | 63 aa hypothetical protein | |||
| 7920 | 85 aa hypothetical protein | |||
| 7925 | M | M.AspMGS1ORFKP (100% identity) | M.Amu28ORF7925P | |
| 7930 | 165 aa hypothetical protein | |||
| 10460 | 196 aa hypothetical protein | |||
| 10465 | M | M.AmuK8ORF10410P (96% identity) | M.Amu28ORF10465P | |
| 10470 | tyrosine recombinase | |||
| 11755 | 121 aa hypothetical protein | |||
| 11760 | M | M.AspMGS1ORFKP (100% identity) | M.Amu28ORF11760P | |
| 11765 | 178 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 515 | 262 aa hypothetical protein | |||
| 520 | M | M.AmuNB28ORFAP (100% identity) | M.Amu28ORF520P | |
| 525 | R | AmuNB28ORFAP (95% identity) | Amu28ORF520P | |
| 530 | restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 525 | restriction endonuclease subunit R | |||
| 530 | R | AmuK8MrrP (100% identity) | Amu28MrrP | |
| 535 | 113 aa hypothetical protein | |||
| 9760 | ApaG domain | |||
| 9765 | R | Amu27McrBP (100% identity) | Amu28McrBP | |
| 9770 | R | AmuAMDK1McrCP (100% identity) | Amu28McrCP | |
| 9775 | serine/threonine protein phosphatase | |||