Klebsiella pneumoniae C2343 |
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Putative Klebsiella pneumoniae C2343 RM systems
Ref: Gao,H. et al. EBioMedicine 51, 102599 (2020)
REBASE ref # 29945
| Sequence length: | GenBank #: | |
| Chromosome: | 5,129,161 bp | CP039823 |
| plasmid pC2343-2-NDM: | 318,848 bp | CP039824 |
| plasmid pC2343-3: | 216,550 bp | CP039825 |
| plasmid pC2343-4-KPC: | 175,540 bp | CP039826 |
REBASE acronym: Kpn2343
Org_num: 38609
All begin FBF55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16540 | IS1 family transposase | |||
| 16545 | M | M.Kpn2315ORF20955P (100% identity) | M.Kpn2343ORF16545P | |
| 16550 | S | S.KpnK307ORF23680P (100% identity) | S.Kpn2343ORF16545P | |
| 16555 | R | Kpn2315ORF20955P (100% identity) | Kpn2343ORF16545P | |
| 16560 | ATPase | |||
| plasmid pC2343-3 | ||||
| 28160 | DUF262 domain-containing protein | |||
| 28165 | M | M.Kpn2315ORF27635P (100% identity) | CAGNNNNNNRTGT | M.Kpn2343ORF28165P |
| 28170 | S | S.Kpn2315ORF27635P (100% identity) | CAGNNNNNNRTGT | S.Kpn2343ORF28165P |
| 28175 | R | Kpn2315ORF27635P (100% identity) | CAGNNNNNNRTGT | Kpn2343ORF28165P |
| 28180 | DNA modification methylase | |||
| 28435 | IS1 family transposase | |||
| 28440 | M | M.Kpn2315ORF27910P (100% identity) | M.Kpn2343ORF28440P | |
| 28450 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1225 | NinG family protein | |||
| 1230 | M | M.Kpn2315ORF10465P (100% identity) | M.Kpn2343ORF1230P | |
| 1235 | antitermination protein | |||
| 3055 | phosphohydrolase | |||
| 3060 | M | M.KspC31ORFBP (100% identity) | CCWGG | M.Kpn2343DcmP |
| 3065 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn2343DcmP | |
| 3070 | drug/metabolite exporter YedA | |||
| 9440 | 146 aa hypothetical protein | |||
| 9450 | M | M.Kpn2315ORF2145P (100% identity) | M.Kpn2343ORF9450P | |
| 9455 | TrmB family transcriptional regulator | |||
| 9485 | SOS-response repressor and protease LexA | |||
| 9490 | M | M.Kpn2315ORF2105P (100% identity) | M.Kpn2343ORF9490P | |
| 9495 | phage N-6-adenine-methyltransferase | |||
| 9490 | DNA cytosine methyltransferase | |||
| 9495 | M | M.Kpn2315ORF2100P (100% identity) | M.Kpn2343ORF9495P | |
| 9500 | 152 aa hypothetical protein | |||
| 21590 | cell division protein DamX | |||
| 21595 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn2343DamP |
| 21600 | ribulose-phosphate 3-epimerase | |||
| plasmid pC2343-2-NDM | ||||
| 26070 | 144 aa hypothetical protein | |||
| ??? | M | M.RplS62ORF30840P (100% identity) | M.Kpn2343ORF26075P | |
| 26080 | R | RplS62ORF30840P (100% identity) | Kpn2343ORF26075P | |
| 26085 | 82 aa hypothetical protein | |||
| 26160 | 81 aa hypothetical protein | |||
| 26165 | M | M.RplS62ORF30940P (100% identity) | M.Kpn2343ORF26165P | |
| 26170 | 1126 aa hypothetical protein | |||
| plasmid pC2343-4-KPC | ||||
| 29195 | 76 aa hypothetical protein | |||
| 29200 | M | M.Kqu19001ORF26435P (100% identity) | M.Kpn2343ORF29200P | |
| 29205 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16555 | type I restriction endonuclease subunit R | |||
| 16560 | R | Kpn2315McrBP (100% identity) | Kpn2343McrBP | |
| 16565 | R | KpnK307McrCP (100% identity) | Kpn2343McrCP | |
| 16570 | IS5 family transposase | |||