|
Putative Pectobacterium parmentieri HC RM systems
Ref: Jee,S. unpublished
REBASE ref # 29923
Complete sequence: 5,208,618 bp
GenBank #: CP046376
REBASE acronym: PpaHC
Org_num: 38475
All begin GMW39_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1010 | WYL domain-containing protein | |||
1015 | M | M.SspW3ORF1087P (100% identity) | M.PpaHCORF1015P | |
1020 | S | S.SspW3ORF1087P (55% identity) | S.PpaHCORF1015P | |
1025 | helix-turn-helix domain-containing protein | |||
16595 | hydroxyacid dehydrogenase | |||
16600 | R | ParQJ311ORF2065P (98% identity) | PpaHCORF16610P | |
16605 | S | S.Spl13ORF1580P (57% identity) | S.PpaHCORF16610P | |
16610 | M | M.Psp3193ORF473P (98% identity) | M.PpaHCORF16610P | |
16615 | DUF4102 domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
720 | 144 aa hypothetical protein | |||
725 | M | M.ParAK049ORF8485P (81% identity) | M.PpaHCORF725P | |
730 | 140 aa hypothetical protein | |||
9960 | molybdopterin-guanine dinucleotide biosynthesis | |||
9965 | M | M.Dsp1600ORFDP (78% identity) | M.PpaHCORF9965P | |
9970 | TIGR02646 family protein | |||
10110 | transcriptional regulator | |||
10115 | R | LposN51ORFAP (82% identity) | PpaHCORF10125P | |
10120 | 357 aa hypothetical protein | |||
??? | M | M.LpoN51ORF11425P (86% identity) | M.PpaHCORF10125P | |
10130 | V | V.LposN51ORFBP (82% identity) | V.PpaHCORF10125P | |
10135 | AAA family ATPase | |||
10575 | 73 aa hypothetical protein | |||
10580 | M | M.Ppa5441ORF8345P (100% identity) | M.PpaHCORF10580P | |
10585 | 86 aa hypothetical protein | |||
12260 | 114 aa hypothetical protein | |||
12265 | M | M.PspA5351ORF11590P (96% identity) | M.PpaHCORF12265P | |
12270 | 93 aa hypothetical protein | |||
14690 | DUF1176 domain-containing protein | |||
14695 | R | Pwa1AORF14510P (100% identity) | PpaHCORF14695P | |
14700 | XRE family transcriptional regulator | |||
21815 | SPOR domain-containing protein | |||
21820 | M | M.PwaDamP (100% identity) | GATC | M.PpaHCDamP |
21825 | ribulose-phosphate 3-epimerase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
16415 | 64 aa hypothetical protein | |||
16420 | R | Pca5702McrCP (88% identity) | PpaHCMcrCP | |
16425 | R | PcaWPP14McrBP (89% identity) | PpaHCMcrBP | |
16430 | 111 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
10215 | 3-5 exoribonuclease | |||
10220 | M | M.Pat21AORF19320P (89% identity) | M.PpaHCORF10220P | |
10225 | replication endonuclease |