Pectobacterium odoriferum JK2.1 |
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Putative Pectobacterium odoriferum JK2.1 RM systems
Ref: Jee,S. unpublished
REBASE ref # 29923
| Sequence length: | GenBank #: | |
| Chromosome: | 4,997,932 bp | CP034938 |
| plasmid p.Jk2_1: | 102,326 bp | CP034939 |
REBASE acronym: PodJK21
Org_num: 38474
All begin EO763_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2175 | restriction endonuclease subunit S | |||
| 2180 | M | M.Cko20903ORF37740P (99% identity) | M.PodJK21ORF2180P | |
| 2185 | S | S.Cko20903ORF37740P (98% identity) | S.PodJK21ORF2180P | |
| 2190 | hydroxyacid dehydrogenase | |||
| 2195 | R | Cko20903ORF37740P (97% identity) | PodJK21ORF2180P | |
| 2200 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5185 | CAAX protease | |||
| 5190 | RM | PatP1526ORF18370P (97% identity) | PodJK21ORF5190P | |
| 5195 | S | S.PatP1526ORF18370P (93% identity) | S.PodJK21ORF5190P | |
| 5200 | DNA-binding protein | |||
| 8380 | DUF4102 domain-containing protein | |||
| 8385 | R | PpaQK5DptFP (97% identity) | PodJK21DptFP | |
| 8390 | DNA phosphorothioation-dependent restriction | |||
| 8385 | DNA phosphorothioation-dependent restriction | |||
| 8390 | R | PpaQK5DptGP (98% identity) | PodJK21DptGP | |
| 8395 | DNA phosphorothioation-dependent restriction | |||
| 8390 | DNA phosphorothioation-dependent restriction | |||
| 8395 | R | Pve1603DptHP (93% identity) | PodJK21DptHP | |
| 8400 | DUF262 domain-containing protein | |||
| 8400 | DUF262 domain-containing protein | |||
| 8405 | M | M.EcoC9965DndEP (91% identity) | M.PodJK21DndEP | |
| 8410 | DNA sulfur modification protein DndD | |||
| 8405 | DNA sulfur modification protein DndE | |||
| 8410 | M | M.PpaQK5DndDP (98% identity) | M.PodJK21DndDP | |
| 8415 | DNA phosphorothioation system sulfurtransferase | |||
| 8410 | DNA sulfur modification protein DndD | |||
| 8415 | M | M.PpaQK5DndCP (99% identity) | M.PodJK21DndCP | |
| 8420 | DNA sulfur modification protein DndB | |||
| 8415 | DNA phosphorothioation system sulfurtransferase | |||
| 8420 | M | M.Par021DndBP (98% identity) | M.PodJK21DndBP | |
| 8425 | transcriptional regulator | |||
| 8505 | integrase | |||
| 8510 | R | Pca251ORF13865P (97% identity) | PodJK21ORF8510P | |
| 8515 | transcriptional regulator | |||
| 20445 | ribulose-phosphate 3-epimerase | |||
| 20450 | M | M.PcaBCS7DamP (99% identity) | GATC | M.PodJK21DamP |
| 20455 | SPOR domain-containing protein | |||
| 21730 | restriction endonuclease | |||
| 21735 | M | M.Pca2AORF755P (99% identity) | M.PodJK21ORF21735P | |
| 21740 | ArsR family transcriptional regulator | |||
| plasmid p.Jk2_1 | ||||
| 22970 | 73 aa hypothetical protein | |||
| ??? | M | M.PatP1526ORF595P (97% identity) | M.PodJK21ORF22975P | |
| 22980 | 72 aa hypothetical protein | |||