Bradyrhizobium species LCT2 |
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Putative Bradyrhizobium species LCT2 RM systems
Ref: Sugawara,M. et al. unpublished
REBASE ref # 29749
Complete sequence: 9,434,376 bp
GenBank #: CP034432
REBASE acronym: BspLCT2
Org_num: 37948
All begin EI171_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8400 | M48 family peptidase | |||
| 8405 | R | Bja5038ORFBP (72% identity) | CRAACNNNNNCTC | BspLCT2IIP |
| 8410 | S | S.Hsp20947ORF13570P (46% identity) | CRAACNNNNNCTC | S.BspLCT2II |
| 8415 | M | M.Bps24758ORF17055P (72% identity) | CRAACNNNNNCTC | M.BspLCT2II |
| 8420 | DUF3768 domain-containing protein | |||
| 35640 | DUF4760 domain-containing protein | |||
| 35645 | M | M.BspCB82ORF32120P (90% identity) | GCAYNNNNNNNTGGT | M.BspLCT2III |
| 35650 | S | S.Pch1ORF6020P (65% identity) | GCAYNNNNNNNTGGT | S.BspLCT2III |
| 35655 | R | Bdi1132ORF22000P (96% identity) | GCAYNNNNNNNTGGT | BspLCT2IIIP |
| 35660 | 117 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8425 | 80 aa hypothetical protein | |||
| 8430 | M | M.SauP157ORF620P (48% identity) | M.BspLCT2ORF8430P | |
| 8435 | type IV secretory system conjugative DNA | |||
| 9305 | 136 aa hypothetical protein | |||
| 9310 | M | M.Bja6KORF1420P (83% identity) | M.BspLCT2ORF9310P | |
| 9315 | 841 aa hypothetical protein | |||
| 22550 | SOS response transcriptional repressor | |||
| ??? | RM | Bsps200ORF36530P (52% identity) | BspLCT2ORF22545P | |
| 22565 | IS701 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 37160 | metalloprotease | |||
| ??? | M | M.Bdis110ORF11155P (100% identity) | GANTC | M.BspLCT2I |
| 37170 | 108 aa hypothetical protein | |||