Escherichia coli O157:H7 FRIK804 |
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Putative Escherichia coli O157:H7 FRIK804 RM systems
Ref: Stanton,E. et al. unpublished
REBASE ref # 29791
| Sequence length: | GenBank #: | |
| Chromosome: | 5,554,243 bp | CP034384 |
| plasmid pO157: | 92,697 bp | CP034385 |
REBASE acronym: Eco804
Org_num: 38083
All begin EJB16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5400 | M48 family peptidase | |||
| 5405 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | Eco804ORF5425P |
| 5410 | Appr-1-p processing protein | |||
| 5415 | DUF4433 domain-containing protein | |||
| 5420 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco804ORF5425P |
| 5425 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco804ORF5425P |
| 5430 | 64 aa hypothetical protein | |||
| 28010 | endoribonuclease SymE | |||
| 28015 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco804ORF28020P |
| 28020 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco804ORF28020P |
| 28025 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco804ORF28020P |
| 28030 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6690 | recombination protein NinB | |||
| 6695 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco804ORF6695P |
| 6700 | NinE family protein | |||
| 8650 | phosphohydrolase | |||
| 8655 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco804DcmP |
| 8660 | V | V.EcosPA8DcmP (100% identity) | V.Eco804DcmP | |
| 8665 | drug/metabolite exporter YedA | |||
| 12500 | DUF1367 family protein | |||
| 12505 | R | Ecos15739ORF2910P (100% identity) | Eco804ORF12515P | |
| 12510 | 329 aa hypothetical protein | |||
| 12515 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco804ORF12515P | |
| 12520 | 81 aa hypothetical protein | |||
| 13425 | 61 aa hypothetical protein | |||
| 13440 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco804ORF13440P | |
| 13445 | TrmB family transcriptional regulator | |||
| 16010 | NinE family protein | |||
| 16015 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco804ORF16015P |
| 16020 | recombination protein NinB | |||
| 22045 | DNA-binding transcriptional regulator Fis | |||
| 22050 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco804ORF22050P |
| 22055 | DUF2556 domain-containing protein | |||
| 22575 | ribulose-phosphate 3-epimerase | |||
| 22580 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco804DamP |
| 22585 | protein DamX | |||
| 27745 | transposase | |||
| 27750 | R | Ecos1613ORF26795P (100% identity) | Eco804ORF27750P | |
| 27755 | N-acetylneuraminate epimerase | |||
| 27785 | DEAD/DEAH box helicase | |||
| 27790 | class I SAM-dependent DNA methyltransferase | |||
| plasmid pO157 | ||||
| 28530 | 59 aa hypothetical protein | |||
| 28535 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco804ORF28535P | |
| 28540 | 73 aa hypothetical protein | |||