Escherichia coli PE15 |
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Putative Escherichia coli PE15 RM systems
Ref: He,D. et al. unpublished
REBASE ref # 29792
| Sequence length: | GenBank #: | |
| Chromosome: | 4,829,265 bp | CP041628 |
| plasmid pPE15-92K: | 92,595 bp | CP041630 |
REBASE acronym: EcoPE15
Org_num: 38084
All begin FNZ59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18350 | NADPH-dependent aldehyde reductase Ahr | |||
| 18360 | R | EcoPSJ29ORF37430P (100% identity) | EcoPE15ORF18370P | |
| 18365 | S | S.EcoPSJ29ORF37430P (100% identity) | S.EcoPE15ORF18370P | |
| 18370 | M | M.EcoPSJ29ORF37430P (100% identity) | M.EcoPE15ORF18370P | |
| 18375 | IS3-like element IS3 family transposase | |||
| 18620 | endoribonuclease SymE | |||
| 18625 | S | S.EcoFG311ORF19910P (100% identity) | CCANNNNNNNRTAYG | S.EcoPE15ORF18630P |
| 18630 | M | M.EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | M.EcoPE15ORF18630P |
| ??? | R | EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | EcoPE15ORF18630P |
| 18640 | restriction endonuclease | |||
| plasmid pPE15-92K | ||||
| 24505 | type II toxin-antitoxin system Phd/YefM family | |||
| 24510 | M | M.EcoprrI (99% identity) | M.EcoPE15ORF24510P | |
| 24515 | S | S.EcoCCORF44310P (100% identity) | S.EcoPE15ORF24510P | |
| 24520 | R | Eco2673ORF27200P (100% identity) | EcoPE15ORF24510P | |
| 24525 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5375 | drug/metabolite exporter YedA | |||
| 5380 | V | V.SsoST152DcmP (100% identity) | V.EcoPE15DcmP | |
| 5385 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPE15DcmP |
| 5390 | phosphohydrolase | |||
| 8935 | ribosome-associated translation inhibitor RaiA | |||
| 8940 | M | M.SenYU39ORF1896P (100% identity) | M.EcoPE15ORF8940P | |
| 8945 | Com family DNA-binding transcriptional | |||
| 12955 | tyrosine-type recombinase/integrase | |||
| 12960 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoPE15ORF12960P |
| 12965 | DUF2556 domain-containing protein | |||
| 13585 | ribulose-phosphate 3-epimerase | |||
| 13590 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPE15DamP |
| 13595 | cell division protein DamX | |||
| 17610 | BREX-1 system phosphatase PglZ type A | |||
| 17615 | RM | EcoMIN11ORF17025P (100% identity) | EcoPE15ORF17615P | |
| 17620 | BREX system P-loop protein BrxC | |||
| 18395 | restriction endonuclease | |||
| 18400 | R | EcoPSJ29ORF37350P (100% identity) | EcoPE15ORF18400P | |
| 18405 | HNH endonuclease | |||
| 23180 | TraR/DksA family transcriptional regulator | |||
| 23185 | M | M.EcoCX12ORF15990P (100% identity) | GATC | M.EcoPE15ORF23185P |
| 23190 | replication endonuclease | |||
| plasmid pPE15-92K | ||||
| 24635 | 63 aa hypothetical protein | |||
| 24650 | M | M.Sen0904ORF23445P (100% identity) | M.EcoPE15ORF24650P | |
| 24655 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18385 | DUF4942 domain-containing protein | |||
| 18390 | R | EcoPSJ29McrB2P (100% identity) | EcoPE15McrB2P | |
| 18395 | R | EcoPSJ29McrC2P (100% identity) | EcoPE15McrC2P | |
| 18400 | HNH endonuclease | |||
| 18610 | R | EcoPSJ29McrCP (100% identity) | EcoPE15McrCP | |
| 18615 | R | EcoPSJ29McrBP (100% identity) | EcoPE15McrBP | |
| 18620 | endoribonuclease SymE | |||
| 18635 | type I restriction-modification system | |||
| 18640 | R | EcoPSJ29MrrP (100% identity) | EcoPE15MrrP | |
| 18645 | GTPase | |||