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Putative Vibrio parahaemolyticus 20160303005-1 RM systems
Ref: Yang,Q. et al. unpublished
REBASE ref # 30083
Sequence length: | GenBank #: | |
chromosome I: | 3,483,160 bp | CP034298 |
chromosome II: | 1,942,957 bp | CP034299 |
plasmid pVPSD2016-2: | 193,123 bp | CP034301 |
plasmid pVPSD2016-4: | 73,460 bp | CP034303 |
plasmid pVPSD2016-5: | 74,488 bp | CP034304 |
REBASE acronym: Vpa0051
Org_num: 39078
All begin EHC69_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2150 | 331 aa hypothetical protein | |||
2155 | S | S.VpaVP17ORF1940P (100% identity) | S.Vpa0051ORF2160P | |
2160 | M | M.VpaVP17ORF1940P (100% identity) | M.Vpa0051ORF2160P | |
2165 | 132 aa hypothetical protein | |||
9720 | 145 aa hypothetical protein | |||
9725 | R | VpaVP17ORF9005P (100% identity) | Vpa0051ORF9750P | |
9730 | DUF1016 domain-containing protein | |||
9735 | 70 aa hypothetical protein | |||
9740 | FRG domain-containing protein | |||
9745 | S | S1.VpaVP17ORF9005P (100% identity) | S1.Vpa0051ORF9750P | |
9750 | M | M.VpaVP17ORF9005P (100% identity) | M.Vpa0051ORF9750P | |
9755 | 263 aa hypothetical protein | |||
chromosome II | ||||
23305 | sigma-54-dependent Fis family transcriptional | |||
23310 | R | VpaVP17ORF22845P (100% identity) | Vpa0051ORF23315P | |
23315 | M | M.VpaVP17ORF22845P (100% identity) | M.Vpa0051ORF23315P | |
23320 | S | S1.VpaVP17ORF22845P (83% identity) | S.Vpa0051ORF23315P | |
23325 | 511 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2175 | 94 aa hypothetical protein | |||
2180 | M | M.VphVPD14ORF14400P (99% identity) | M.Vpa0051ORF2180P | |
2185 | Abi family protein | |||
15610 | ribulose-phosphate 3-epimerase | |||
15615 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa0051DamP |
15620 | cell division protein DamX | |||
plasmid pVPSD2016-2 | ||||
27285 | RM | VpaLH80ORF24700P (100% identity) | Vpa0051ORF27285P | |
27290 | DNA repair protein | |||
27430 | 80 aa hypothetical protein | |||
27435 | M | M.VowVC2WORF33925P (100% identity) | M.Vpa0051ORF27435P | |
27440 | 91 aa hypothetical protein | |||
plasmid pVPSD2016-5 | ||||
29555 | 366 aa hypothetical protein | |||
29560 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa0051ORF29560P | |
29565 | IS5 family transposase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pVPSD2016-4 | ||||
29190 | mobile mystery protein B | |||
29195 | R | VphR14ORF25980P (100% identity) | Vpa0051ORF29200P | |
29200 | M | M.VphR14ORF25980P (100% identity) | M.Vpa0051ORF29200P | |
29205 | transcription factor | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2220 | AlpA family phage regulatory protein | |||
2225 | R | VpaVP17MrrP (100% identity) | Vpa0051MrrP | |
2230 | preprotein translocase subunit SecB |