Vibrio parahaemolyticus 20140829008-1 |
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Putative Vibrio parahaemolyticus 20140829008-1 RM systems
Ref: Yang,Q. et al. unpublished
REBASE ref # 30083
| Sequence length: | GenBank #: | |
| chromosome I: | 3,358,530 bp | CP034294 |
| plasmid pVPGD2014-2: | 71,249 bp | CP034297 |
REBASE acronym: Vpa0081
Org_num: 39073
All begin EHC66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 3155 | DUF2787 domain-containing protein | |||
| 3160 | R | VpaG855ORF1285P (100% identity) | Vpa0081ORF3175P | |
| 3165 | S | S.VpaG855ORF1285P (100% identity) | S.Vpa0081ORF3175P | |
| 3170 | anticodon nuclease | |||
| 3175 | M | M.VpaVP17ORF14050P (100% identity) | M.Vpa0081ORF3175P | |
| 3180 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 665 | site-specific integrase | |||
| 670 | R | Val12GORF9537P (100% identity) | Vpa0081ORF675P | |
| ??? | M | M.Vpa0011ORF675P (100% identity) | M.Vpa0081ORF675P | |
| 680 | 411 aa hypothetical protein | |||
| 1915 | cell division protein DamX | |||
| 1920 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa0081DamP |
| 1925 | ribulose-phosphate 3-epimerase | |||
| 14395 | RNA polymerase sigma factor RpoD | |||
| 14405 | M | M.VphR14ORF14045P (100% identity) | M.Vpa0081ORF14405P | |
| 14410 | R | ValXWV9ORF1835P (99% identity) | Vpa0081ORF14405P | |
| 14415 | 324 aa hypothetical protein | |||
| plasmid pVPGD2014-2 | ||||
| 26580 | IS5 family transposase | |||
| 26585 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa0081ORF26585P | |
| 26590 | 366 aa hypothetical protein | |||