Xanthomonas cucurbitae ATCC 23378 |
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Putative Xanthomonas cucurbitae ATCC 23378 RM systems
Ref: Hind,S.R. unpublished
REBASE ref # 29768
Complete sequence: 4,601,253 bp
GenBank #: CP033326
REBASE acronym: Xcu23378
Org_num: 38011
All begin EBN15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4645 | M1 family peptidase | |||
| 4650 | S | S.Xcu359ORF4630P (95% identity) | S.Xcu23378ORF4655P | |
| 4655 | M | M.Xcu456ORF13835P (100% identity) | M.Xcu23378ORF4655P | |
| 4660 | Fic family protein | |||
| 4665 | R | Xcu359ORF4630P (100% identity) | Xcu23378ORF4655P | |
| 4670 | 77 aa hypothetical protein | |||
| 13505 | restriction endonuclease subunit S | |||
| 13510 | M | M.Xcu456ORF5330P (100% identity) | M.Xcu23378ORF13510P | |
| 13515 | damage-inducible protein D | |||
| 13520 | hydroxyacid dehydrogenase | |||
| 13525 | S | S2.Xcu359ORF13505P (100% identity) | S.Xcu23378ORF13510P | |
| 13530 | R | Xcu456ORF5330P (100% identity) | Xcu23378ORF13510P | |
| 13535 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 555 | hemolysin III family protein | |||
| 560 | M | M.Xcu456ORF510P (100% identity) | M.Xcu23378ORF560P | |
| 565 | XRE family transcriptional regulator | |||
| 570 | R | Xcu456ORF510P (96% identity) | Xcu23378ORF560P | |
| 575 | 141 aa hypothetical protein | |||
| 8840 | phosphoadenosine phosphosulfate reductase | |||
| 8845 | M | M.Xcu359ORF8755P (100% identity) | M.Xcu23378ORF8845P | |
| 8850 | 78 aa hypothetical protein | |||
| 9055 | phage portal protein | |||
| 9065 | M | M.Xcu359ORF8975P (100% identity) | M.Xcu23378ORF9065P | |
| 9070 | 248 aa hypothetical protein | |||
| 14540 | RNA-directed DNA polymerase | |||
| 14545 | M | M1.XphBRA241ORF11060P (88% identity) | M1.Xcu23378ORF14545P | |
| 14550 | M | M.Pfl6R8ORF10885P (62% identity) | M2.Xcu23378ORF14545P | |
| 14555 | phosphoadenosine phosphosulfate reductase | |||
| 16065 | 346 aa hypothetical protein | |||
| 16070 | M | M.Xcu359ORF15700P (92% identity) | M.Xcu23378ORF16070P | |
| 16075 | 8-oxoguanine DNA glycosylase | |||
| 17735 | 56 aa hypothetical protein | |||
| 17740 | M | M.Xcu456ORF16990P (100% identity) | M.Xcu23378ORF17740P | |
| 17745 | V | V.Xcu456ORF16990P (100% identity) | V.Xcu23378ORF17740P | |
| 17750 | R | Xcu359ORF17365P (100% identity) | Xcu23378ORF17740P | |
| 17755 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7085 | 94 aa hypothetical protein | |||
| 7090 | M | M.Xcu359ORF7015P (100% identity) | M.Xcu23378ORF7090P | |
| 7095 | R | Xcu359ORF7015P (100% identity) | Xcu23378ORF7090P | |
| 7100 | 576 aa hypothetical protein | |||