Escherichia coli NCCP 15739 |
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Putative Escherichia coli NCCP 15739 RM systems
Ref: Yu,W.S. et al. unpublished
REBASE ref # 29691
| Sequence length: | GenBank #: | |
| Chromosome: | 5,476,008 bp | CP041747 |
| plasmid unnamed: | 91,398 bp | CP041748 |
REBASE acronym: Ecos15739
Org_num: 37697
All begin FOV74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19355 | endoribonuclease SymE | |||
| 19360 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Ecos15739ORF19365P |
| 19365 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Ecos15739ORF19365P |
| 19370 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Ecos15739ORF19365P |
| 19375 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1275 | TrmB family transcriptional regulator | |||
| 1280 | M | M.EcosPA8ORF27255P (100% identity) | M.Ecos15739ORF1280P | |
| 1295 | 61 aa hypothetical protein | |||
| 2895 | DUF1367 family protein | |||
| 2900 | R | EcoW14588ORF3860P (100% identity) | Ecos15739ORF2910P | |
| 2905 | 329 aa hypothetical protein | |||
| 2910 | M | M.EcoW14588ORF3860P (100% identity) | M.Ecos15739ORF2910P | |
| 2915 | 81 aa hypothetical protein | |||
| 5890 | drug/metabolite exporter YedA | |||
| 5895 | V | V.EcosPA8DcmP (100% identity) | V.Ecos15739DcmP | |
| 5900 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecos15739DcmP |
| 5905 | phosphohydrolase | |||
| 7370 | NinE family protein | |||
| 7375 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Ecos15739ORF7375P |
| 7380 | recombination protein NinB | |||
| 13375 | DNA-binding transcriptional regulator Fis | |||
| 13380 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Ecos15739ORF13380P |
| 13385 | DUF2556 domain-containing protein | |||
| 13910 | ribulose-phosphate 3-epimerase | |||
| 13915 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos15739DamP |
| 13920 | cell division protein DamX | |||
| 19090 | transposase | |||
| 19095 | R | Ecos1613ORF26795P (100% identity) | Ecos15739ORF19095P | |
| 19100 | N-acetylneuraminate epimerase | |||
| 19130 | DEAD/DEAH box helicase | |||
| 19135 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Ecos15739ORF19135P |
| 25820 | recombination protein NinB | |||
| 25825 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Ecos15739ORF25825P |
| 25830 | NinE family protein | |||
| plasmid unnamed | ||||
| 28330 | 59 aa hypothetical protein | |||
| 28335 | M | M.EcosPA8ORF27775P (100% identity) | M.Ecos15739ORF28335P | |
| 28340 | 73 aa hypothetical protein | |||