Variovorax species PBS-H4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Variovorax species PBS-H4 RM systems
Ref: Werner,J. unpublished
REBASE ref # 27831
Complete sequence: 6,429,821 bp
GenBank #: LR594675
REBASE acronym: VspPBSH4
Org_num: 38996
All begin H4CHR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2500 | 3-beta-hydroxysteroid dehydrogenase | |||
| 2501 | S | S.VspRA8ORF2705P (91% identity) | S.VspPBSH4ORF2502P | |
| 2502 | M | M.VspPBLH6ORF2339P (94% identity) | M.VspPBSH4ORF2502P | |
| 2503 | Succinylglutamate desuccinylase / Aspartoacylase | |||
| 6046 | 246 aa hypothetical protein | |||
| 6047 | R | VspRA8ORF6146P (85% identity) | VspPBSH4ORF6048P | |
| 6048 | M | M.VspRA8ORF6146P (87% identity) | M.VspPBSH4ORF6048P | |
| 6049 | S | S.VspPBLH6ORF5578P (86% identity) | S.VspPBSH4ORF6048P | |
| 6050 | 330 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4173 | 506 aa hypothetical protein | |||
| 4174 | V | V.VspPBLH6ORF3960P (98% identity) | V.VspPBSH4ORF4176P | |
| 4175 | 610 aa hypothetical protein | |||
| 4176 | M | M.VspPBLH6ORF3960P (98% identity) | M.VspPBSH4ORF4176P | |
| 4177 | 71 aa hypothetical protein | |||
| 4414 | 317 aa hypothetical protein | |||
| 4415 | M | M.AdeBCORF1423P (45% identity) | M1.VspPBSH4ORF4415P | |
| 4416 | 108 aa hypothetical protein | |||
| 4417 | M | M.BspEMB26ORF6260P (61% identity) | M2.VspPBSH4ORF4415P | |
| 4418 | 85 aa hypothetical protein | |||