Variovorax species PBL-E5 |
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Putative Variovorax species PBL-E5 RM systems
Ref: Werner,J. unpublished
REBASE ref # 27831
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,660,820 bp | LR594671 |
| plasmid 2: | 801,539 bp | LR594672 |
| plasmid 4: | 71,037 bp | LR594674 |
REBASE acronym: VspPBLE5
Org_num: 38994
All begin E5CHR_, E5P1_, E5P3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3369 | Succinylglutamate desuccinylase / Aspartoacylase | |||
| 3370 | M | M.VspSRS16ORF3363P (99% identity) | M.VspPBLE5ORF3370P | |
| 3371 | S | S.VspSRS16ORF3363P (98% identity) | S.VspPBLE5ORF3370P | |
| 3372 | LIV-I protein F | |||
| 5436 | 247 aa hypothetical protein | |||
| 5437 | R | VspSRS16ORF5490P (97% identity) | VspPBLE5ORF5439P | |
| 5438 | S | S1.VspSRS16ORF5490P (96% identity) | S1.VspPBLE5ORF5439P | |
| 5439 | M | M.VspSRS16ORF5490P (99% identity) | M.VspPBLE5ORF5439P | |
| 5440 | S | S2.VspSRS16ORF5490P (97% identity) | S2.VspPBLE5ORF5439P | |
| 5441 | 332 aa hypothetical protein | |||
| plasmid 2 | ||||
| 245 | 69 aa hypothetical protein | |||
| 246 | M | M.VspSRS16ORF248P (100% identity) | M.VspPBLE5ORF246P | |
| 247 | S | S.VspWDL1ORF252P (100% identity) | S.VspPBLE5ORF246P | |
| 248 | R | VspSRS16ORF248P (100% identity) | VspPBLE5ORF246P | |
| 249 | 154 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 569 | 360 aa hypothetical protein | |||
| 570 | R | Cva205ORFBP (44% identity) | VspPBLE5ORF571P | |
| 571 | M | M.Cva205ORFBP (65% identity) | M.VspPBLE5ORF571P | |
| 572 | 133 aa hypothetical protein | |||
| 4843 | DNA sulfur modification protein DndE | |||
| 4844 | M | M.AspLE5DndDP (87% identity) | M.VspPBLE5DndDP | |
| 4845 | sulfurtransferase DndC | |||
| 4844 | DNA sulfur modification protein DndD | |||
| 4845 | M | M.AspLE5DndCP (89% identity) | M.VspPBLE5DndCP | |
| 4846 | DNA sulfur modification protein DndB | |||
| 4845 | sulfurtransferase DndC | |||
| 4846 | M | M.AspLE5DndBP (91% identity) | M.VspPBLE5DndBP | |
| 4847 | 80 aa hypothetical protein | |||
| 5159 | H(+)/Cl(-) exchange transporter ClcA | |||
| 5160 | R | VspSRS16ORF5205P (98% identity) | VspPBLE5ORF5161P | |
| 5161 | M | M.VspSRS16ORF5205P (82% identity) | M.VspPBLE5ORF5161P | |
| 5162 | Excinuclease ABC subunit A | |||
| plasmid 2 | ||||
| 693 | 96 aa hypothetical protein | |||
| 694 | M | M.VspSRS16ORF701P (100% identity) | M.VspPBLE5ORF694P | |
| 695 | 131 aa hypothetical protein | |||
| 839 | Tyrosine recombinase XerC | |||
| 840 | R | VspSRS16ORF847P (100% identity) | VspPBLE5ORF840P | |
| 841 | 338 aa hypothetical protein | |||
| 840 | 374 aa hypothetical protein | |||
| 841 | M | M1.VspSRS16ORF848P (100% identity) | M1.VspPBLE5ORF841P | |
| 842 | M | M2.VspSRS16ORF848P (100% identity) | M2.VspPBLE5ORF841P | |
| 843 | 229 aa hypothetical protein | |||
| plasmid 4 | ||||
| 1 | Plasmid replication initiator protein TrfA | |||
| 2 | R | VspSRS16ORF43P (92% identity) | VspPBLE5ORF3P | |
| 3 | M | M.VspSRS16ORF43P (100% identity) | M.VspPBLE5ORF3P | |
| 4 | Transposase, TnpA family | |||