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Putative Citrobacter freundii LDL3-3 RM systems
Ref: Gao,X. et al. unpublished
REBASE ref # 29449
Complete sequence: 4,878,270 bp
GenBank #: CP047247
REBASE acronym: CfrLDL33
Org_num: 37147
All begin GRP89_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20435 | helix-turn-helix domain-containing protein | |||
20440 | M | M.Kpn10006I (97% identity) | M.CfrLDL33ORF20440P | |
20445 | S | S.Eho916ORF2795P (94% identity) | S.CfrLDL33ORF20440P | |
20450 | R | RspHC6ORFAP (98% identity) | CfrLDL33ORF20440P | |
20455 | AAA domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1730 | cell division protein DamX | |||
1735 | M | M.Eco11104DamP (100% identity) | GATC | M.CfrLDL33DamP |
1740 | ribulose-phosphate 3-epimerase | |||
2230 | DUF2556 domain-containing protein | |||
2235 | M | M.Csp302ORFAP (100% identity) | ATGCAT | M.CfrLDL33ORF2235P |
2240 | DNA-binding transcriptional regulator Fis | |||
3235 | DUF2732 family protein | |||
3240 | M | M.EcoFec101ORF21155P (98% identity) | M.CfrLDL33ORF3240P | |
3245 | 70 aa hypothetical protein | |||
5795 | 118 aa hypothetical protein | |||
5800 | R | CpoC275ORFBP (99% identity) | C | CfrLDL33ORF5800P |
5805 | toxin | |||
9105 | phosphohydrolase | |||
??? | M | M.CpoC2ORFBP (98% identity) | CCWGG | M.CfrLDL33ORF9110P |
9115 | V | V.CpoK218ORF11815P (99% identity) | V.CfrLDL33ORF9110P | |
9120 | drug/metabolite exporter YedA | |||
9990 | TraR/DksA family transcriptional regulator | |||
9995 | M | M.CfrE5ORF13870P (95% identity) | M.CfrLDL33ORF9995P | |
10000 | phage N-6-adenine-methyltransferase | |||
9995 | DNA cytosine methyltransferase | |||
10000 | M | M.Lad320ORF21440P (96% identity) | M.CfrLDL33ORF10000P | |
10005 | 94 aa hypothetical protein | |||
15265 | replication endonuclease | |||
15270 | M | M.Ceu1490ORF7320P (99% identity) | M.CfrLDL33ORF15270P | |
15275 | TraR/DksA family transcriptional regulator | |||
20325 | FAD-dependent oxidoreductase | |||
20330 | R | Cpo5ORF14650P (100% identity) | CfrLDL33ORF20330P | |
20335 | 377 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20450 | DEAD/DEAH box helicase family protein | |||
20455 | R | YreW13McrBP (97% identity) | CfrLDL33McrBP | |
20460 | R | YreW13McrCP (97% identity) | CfrLDL33McrCP | |
20465 | 95 aa hypothetical protein |