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Putative Trichormus variabilis 0441 RM systems
Ref: Zhenavchuk,O.F. et al. unpublished
REBASE ref # 30073
Sequence length: | GenBank #: | |
Chromosome: | 6,377,767 bp | CP047242 |
plasmid unnamed1: | 362,032 bp | CP047243 |
plasmid unnamed2: | 293,397 bp | CP047244 |
plasmid unnamed4: | 27,054 bp | CP047246 |
REBASE acronym: Tva0441
Org_num: 38986
All begin GSQ19_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11035 | DUF45 domain-containing protein | |||
11040 | R | AvrIVP (100% identity) | Tva0441ORF11055P | |
11045 | transcriptional regulator | |||
11050 | S | S.AvrIV (100% identity) | S.Tva0441ORF11055P | |
11055 | M | M.AvrIV (100% identity) | M.Tva0441ORF11055P | |
11060 | MerR family transcriptional regulator | |||
22170 | DUF4325 domain-containing protein | |||
22175 | S | S.AvrVII (100% identity) | S.Tva0441ORF22195P | |
22180 | 72 aa hypothetical protein | |||
22185 | PIN domain-containing protein | |||
22190 | 86 aa hypothetical protein | |||
22195 | M | M.AvrVII (100% identity) | M.Tva0441ORF22195P | |
22200 | 330 aa hypothetical protein | |||
22205 | R | AvrVIIP (100% identity) | Tva0441ORF22195P | |
22210 | AbrB/MazE/SpoVT family DNA-binding | |||
23355 | helix-turn-helix domain-containing protein | |||
23360 | M | M.AvaBORF3498P (100% identity) | M.Tva0441ORF23360P | |
23365 | S | S.AvrIII (100% identity) | S.Tva0441ORF23360P | |
23370 | UPF0175 family protein | |||
23375 | DUF3368 domain-containing protein | |||
23380 | R | AvrIIIP (100% identity) | Tva0441ORF23360P | |
23385 | 46 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1535 | signal recognition particle protein | |||
1540 | M | M.AspYBS01ORF23465P (100% identity) | M.Tva0441ORF1540P | |
1545 | urea ABC transporter substrate-binding protein | |||
1775 | cytochrome b/b6 domain-containing protein | |||
1780 | M | M.AvrVI (100% identity) | M.Tva0441ORF1780P | |
1785 | anthranilate phosphoribosyltransferase | |||
5635 | Uma2 family endonuclease | |||
5640 | M | M.AvrORFIP (100% identity) | CGATCG | M.Tva0441ORF5640P |
5645 | methyltransferase | |||
8870 | deoxyribose-phosphate aldolase | |||
8875 | M | M.AvrORFHP (100% identity) | M.Tva0441ORF8875P | |
8880 | DUF697 domain-containing protein | |||
11880 | helicase | |||
11885 | RM | AvrORFFP (100% identity) | Tva0441ORF11885P | |
11890 | IS200/IS605 family transposase | |||
16245 | DUF3883 domain-containing protein | |||
16250 | M | M.AvrORFQP (100% identity) | M.Tva0441ORF16250P | |
16255 | 147 aa hypothetical protein | |||
16335 | DGQHR domain-containing protein | |||
16340 | M | M.AvrDndCP (100% identity) | M.Tva0441DndCP | |
16345 | DNA sulfur modification protein DndD | |||
16340 | DNA phosphorothioation system sulfurtransferase | |||
16345 | M | M.AvrDndDP (100% identity) | M.Tva0441DndDP | |
16350 | DNA sulfur modification protein DndE | |||
16345 | DNA sulfur modification protein DndD | |||
16350 | M | M.AvrDndEP (100% identity) | M.Tva0441DndEP | |
16355 | tetratricopeptide repeat protein | |||
18470 | 59 aa hypothetical protein | |||
18475 | M | M.AvrORFRP (100% identity) | M.Tva0441ORF18475P | |
18485 | 79 aa hypothetical protein | |||
19005 | DUF427 domain-containing protein | |||
19010 | M | M.AvrV (100% identity) | GATC | M.Tva0441ORF19010P |
19015 | DUF751 domain-containing protein | |||
20810 | 70 aa hypothetical protein | |||
20815 | M | M.AvrORFDP (100% identity) | M.Tva0441ORF20815P | |
20820 | cyanase | |||
21715 | DUF3493 domain-containing protein | |||
21725 | R | AvaBORF3181P (100% identity) | CYCGRG | Tva0441ORF21730P |
21730 | M | M.AvrORFCP (100% identity) | M.Tva0441ORF21730P | |
21735 | M28 family peptidase | |||
plasmid unnamed1 | ||||
28110 | ASCH domain-containing protein | |||
28115 | M | M.AvrORFLP (100% identity) | M.Tva0441ORF28115P | |
28120 | DUF1392 domain-containing protein | |||
plasmid unnamed2 | ||||
29240 | DEAD/DEAH box helicase family protein | |||
29245 | M | M.AvrORFMP (100% identity) | M.Tva0441ORF29245P | |
29250 | 195 aa hypothetical protein | |||
29285 | AAA family ATPase | |||
29290 | RM | AvaBORF223P (100% identity) | Tva0441ORF29290P | |
29295 | GNAT family N-acetyltransferase | |||
plasmid unnamed4 | ||||
29580 | 84 aa hypothetical protein | |||
29585 | RM | AvrORFOP (100% identity) | Tva0441ORF29585P | |
29590 | S | S.AvrORFOP (68% identity) | S.Tva0441ORF29585P | |
29595 | AAA family ATPase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid unnamed1 | ||||
26890 | AAA family ATPase | |||
26895 | R | AvrMrrP (100% identity) | Tva0441MrrP | |
26900 | 72 aa hypothetical protein |