Glaesserella parasuis GZ20170512 |
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Putative Glaesserella parasuis GZ20170512 RM systems
Ref: Yan,H. et al. unpublished
REBASE ref # 29709
Complete sequence: 2,266,893 bp
GenBank #: CP029150
REBASE acronym: Gpa70512
Org_num: 37740
All begin C3363_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5175 | 3-phosphoserine/phosphohydroxythreonine | |||
| 5180 | M | M.GpaXP11ORF3145P (99% identity) | M.Gpa70512ORF5180P | |
| 5185 | S | S.Hpa33ORF7204P (100% identity) | S.Gpa70512ORF5180P | |
| 5190 | R | Hpa33ORF7204P (99% identity) | Gpa70512ORF5180P | |
| 5195 | histidinol-phosphate transaminase | |||
| 6810 | apolipoprotein N-acyltransferase | |||
| 6815 | R | Hpa33ORF6320P (100% identity) | Gpa70512ORF6830P | |
| 6820 | anticodon nuclease | |||
| 6825 | S | S.Hpa33ORF6320P (99% identity) | S.Gpa70512ORF6830P | |
| 6830 | M | M.HpaMNHORF509P (100% identity) | M.Gpa70512ORF6830P | |
| 6835 | RNA polymerase sigma factor RpoE | |||
| 10650 | 101 aa hypothetical protein | |||
| 10655 | R | HpaMNHORF1257P (100% identity) | Gpa70512ORF10680P | |
| 10660 | 145 aa hypothetical protein | |||
| 10665 | DUF1829 domain-containing protein | |||
| 10670 | S | S.Gpa104ORFQP (49% identity) | S.Gpa70512ORF10680P | |
| 10675 | anticodon nuclease | |||
| 10680 | M | M.Hpa33ORF5528P (99% identity) | M.Gpa70512ORF10680P | |
| 10685 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | restriction endonuclease subunit M | |||
| 1205 | S | S.Gpa104ORFOP (98% identity) | S.Gpa70512ORF1215P | |
| 1210 | R | HpaSH03ORF4035P (99% identity) | Gpa70512ORF1215P | |
| 1215 | M | M.HpaSHORF1954P (100% identity) | M.Gpa70512ORF1215P | |
| 1220 | M48 family peptidase | |||
| 2295 | 2-hydroxyacid dehydrogenase | |||
| 2300 | R | HpaST41ORF8905P (100% identity) | Gpa70512ORF2305P | |
| 2305 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa70512ORF2305P | |
| 2310 | flavodoxin-dependent | |||
| 2810 | 86 aa hypothetical protein | |||
| 2815 | M | M.Gpa1818ORF5330P (100% identity) | M.Gpa70512ORF2815P | |
| 2820 | enoyl-CoA hydratase | |||
| 3345 | sodium-dependent transporter | |||
| 3350 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa70512ORF3350P |
| 3355 | 3-dehydroquinate synthase | |||
| 4750 | chromosome partition protein MukE | |||
| 4755 | M | M.Gpa1818ORF5375P (100% identity) | M.Gpa70512ORF4755P | |
| 4760 | 199 aa hypothetical protein | |||
| 5440 | M48 family peptidase | |||
| ??? | M | M.HpaSW140ORF1138P (55% identity) | M.Gpa70512ORF5445P | |
| 5450 | HNH endonuclease | |||
| 5445 | modification methylase | |||
| 5450 | R | HpaSH03ORF4035P (80% identity) | Gpa70512ORF5450P | |
| 5455 | S | S.Hpa33ORF10915P (80% identity) | S.Gpa70512ORF5450P | |
| 5460 | restriction endonuclease subunit M | |||
| 6395 | 547 aa hypothetical protein | |||
| 6400 | M | M.HpaSHORF629P (100% identity) | M.Gpa70512ORF6400P | |
| 6405 | addiction module antidote protein | |||
| 7790 | 125 aa hypothetical protein | |||
| 7795 | M | M.Gpa104ORFIP (92% identity) | M.Gpa70512ORF7795P | |
| 7800 | aspartate-semialdehyde dehydrogenase | |||
| 10420 | cell filamentation protein Fic | |||
| 10425 | S | S1.Gpa104ORFGP (68% identity) | S.Gpa70512ORF10430P | |
| 10430 | RM | Hpa33ORF5785P (100% identity) | Gpa70512ORF10430P | |
| 10435 | DUF4143 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2485 | beta-ketoacyl-ACP synthase I | |||
| 2490 | R | Hpa33ORFAP (100% identity) | Gpa70512ORF2495P | |
| 2495 | M | M.Gpa1808ORF2455P (98% identity) | M.Gpa70512ORF2495P | |
| 2500 | DUF4391 domain-containing protein | |||
| 9775 | Fic family protein | |||
| 9780 | R | Hpa33ORFBP (100% identity) | Gpa70512ORF9785P | |
| 9785 | M | M2.Hpa33ORFBP (100% identity) | M.Gpa70512ORF9785P | |
| 9790 | restriction endonuclease subunit M | |||
| 10100 | DUF4143 domain-containing protein | |||
| 10105 | M | M.HpaSHORF1827P (83% identity) | M.Gpa70512ORF10105P | |
| 10110 | R | GpaH80ORF9040P (99% identity) | Gpa70512ORF10105P | |
| 10115 | transcriptional regulator | |||