Clostridioides difficile 21018 |
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Putative Clostridioides difficile 21018 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,498,460 bp
GenBank #: PZRK00000000 (NZ_PZRK00000000)
REBASE acronym: Cdi21018
Org_num: 36167
All begin DA431_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15980 | DUF262 domain-containing protein | |||
| 15985 | R | CdiCd8ORF15865P (100% identity) | CANNNNNNNTAAAG | Cdi21018ORF16010P |
| 15990 | 142 aa hypothetical protein | |||
| 15995 | nucleotidyltransferase domain-containing | |||
| 16000 | 102 aa hypothetical protein | |||
| 16005 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi21018ORF16010P |
| 16010 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi21018ORF16010P |
| 16015 | ketose-bisphosphate aldolase | |||
| 18040 | 424 aa hypothetical protein | |||
| 18045 | R | CdiTTIIIP (100% identity) | ATCNNNNNNCTC | Cdi21018ORF18055P |
| 18050 | S | S.CdiTTIII (100% identity) | ATCNNNNNNCTC | S.Cdi21018ORF18055P |
| 18055 | M | M.CdiTTIII (100% identity) | ATCNNNNNNCTC | M.Cdi21018ORF18055P |
| 18060 | C | C.SanVSI16ORF6495P (100% identity) | C.Cdi21018ORF18055P | |
| 18065 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21185 | N-acetylmuramoyl-L-alanine amidase | |||
| 21190 | M | M.Pdi9689ORF3833P (100% identity) | M.Cdi21018ORF21190P | |
| 21195 | CopY family transcriptional regulator | |||
| 14695 | patatin-like phospholipase family protein | |||
| 14700 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi21018ORF14700P |
| 14705 | Rrf2 family transcriptional regulator | |||
| 16455 | LytTR family transcriptional regulator | |||
| 16460 | M | M.Pdi9689DndCP (100% identity) | M.Cdi21018DndCP | |
| 16465 | DNA sulfur modification protein DndD | |||
| 16460 | DNA phosphorothioation system sulfurtransferase | |||
| 16465 | M | M.Pdi9689DndDP (100% identity) | M.Cdi21018DndDP | |
| 16470 | DUF1832 domain-containing protein | |||
| 16465 | DNA sulfur modification protein DndD | |||
| 16470 | M | M.Pdi9689DndEP (100% identity) | M.Cdi21018DndEP | |
| 16475 | 1078 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11045 | AAA family ATPase | |||
| 11050 | R | Pdi6602McrCP (100% identity) | Cdi21018McrCP | |
| 11055 | R | CdiM161McrBP (100% identity) | Cdi21018McrBP | |
| 11060 | cell division protein | |||