Clostridioides difficile 20707 |
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Putative Clostridioides difficile 20707 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,292,951 bp
GenBank #: PZRI00000000 (NZ_PZRI00000000)
REBASE acronym: Cdi20707
Org_num: 36162
All begin DA428_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3615 | 115 aa hypothetical protein | |||
| 3620 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi20707I |
| 3625 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi20707I |
| 3630 | 423 aa hypothetical protein | |||
| 3635 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi20707IP |
| 3640 | 111 aa hypothetical protein | |||
| 4160 | ketose-bisphosphate aldolase | |||
| 4165 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.Cdi20707IV |
| 4170 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.Cdi20707IV |
| 4175 | 102 aa hypothetical protein | |||
| 4180 | nucleotidyltransferase domain-containing | |||
| 4185 | 142 aa hypothetical protein | |||
| 4190 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | Cdi20707IVP |
| 4195 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3700 | recombinase family protein | |||
| 3705 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi20707III |
| 3710 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M2.Cdi20707IIIP |
| 3715 | 383 aa hypothetical protein | |||
| 3790 | 872 aa hypothetical protein | |||
| 3795 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20707ORF3795P |
| 3800 | class B sortase | |||
| 5470 | Rrf2 family transcriptional regulator | |||
| 5475 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20707II |
| 5480 | patatin-like phospholipase family protein | |||
| 12470 | 39 aa hypothetical protein | |||
| 12475 | M | M.CdiS0352ORF4245P (100% identity) | M.Cdi20707ORF12475P | |
| 12480 | 39 aa hypothetical protein | |||
| 15280 | 69 aa hypothetical protein | |||
| 15285 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi20707ORF15285P | |
| 15290 | 111 aa hypothetical protein | |||
| 19480 | 73 aa hypothetical protein | |||
| 19485 | M | M.Pdi30ORF7740P (100% identity) | M.Cdi20707ORF19485P | |
| 19490 | 38 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9435 | cell division protein | |||
| 9440 | R | Pdi30McrBP (100% identity) | Cdi20707McrBP | |
| 9445 | R | Pdi30McrCP (100% identity) | Cdi20707McrCP | |
| 9450 | AAA family ATPase | |||