Clostridioides difficile 20483 |
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Putative Clostridioides difficile 20483 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,451,150 bp
GenBank #: PZRE00000000 (NZ_PZRE00000000)
REBASE acronym: Cdi20483
Org_num: 36155
All begin DA423_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17175 | DUF262 domain-containing protein | |||
| 17180 | R | CdiCd8ORF15865P (100% identity) | CANNNNNNNTAAAG | Cdi20483IIP |
| 17185 | 142 aa hypothetical protein | |||
| 17190 | nucleotidyltransferase domain-containing | |||
| 17195 | 102 aa hypothetical protein | |||
| 17200 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi20483II |
| 17205 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi20483II |
| 17210 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | 266 aa hypothetical protein | |||
| 180 | M | M.CdiAKORF19810P (100% identity) | M1.Cdi20483ORF180P | |
| 185 | M | M2.Cdi21302ORFAP (100% identity) | M2.Cdi20483ORF180P | |
| 190 | 127 aa hypothetical protein | |||
| 11625 | 71 aa hypothetical protein | |||
| 11630 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi20483ORF18870P | |
| 11635 | 38 aa hypothetical protein | |||
| 15890 | patatin-like phospholipase family protein | |||
| 15895 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20483I |
| 15900 | Rrf2 family transcriptional regulator | |||
| 17915 | class B sortase | |||
| 17920 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20483ORF17920P |
| 17925 | 872 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12190 | AAA family ATPase | |||
| 12195 | R | Pdi6602McrCP (100% identity) | Cdi20483McrCP | |
| 12200 | R | CdiM161McrBP (100% identity) | Cdi20483McrBP | |
| 12205 | cell division protein | |||