Clostridioides difficile 20916 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile 20916 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,210,687 bp
GenBank #: PZRB00000000 (NZ_PZRB00000000)
REBASE acronym: Cdi20916
Org_num: 36165
All begin DA419_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16545 | DUF262 domain-containing protein | |||
| 16550 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | Cdi20916IVP |
| 16555 | 142 aa hypothetical protein | |||
| 16560 | nucleotidyltransferase domain-containing | |||
| 16565 | 102 aa hypothetical protein | |||
| 16570 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.Cdi20916IV |
| 16575 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.Cdi20916IV |
| 16580 | ketose-bisphosphate aldolase | |||
| 17100 | 111 aa hypothetical protein | |||
| 17105 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi20916IP |
| 17110 | 423 aa hypothetical protein | |||
| 17115 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi20916I |
| 17120 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi20916I |
| 17125 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1880 | 38 aa hypothetical protein | |||
| 1885 | M | M.Pdi30ORF7740P (100% identity) | M.Cdi20916ORF1885P | |
| 1890 | 73 aa hypothetical protein | |||
| 6085 | 111 aa hypothetical protein | |||
| 6090 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi20916ORF6090P | |
| 6095 | 69 aa hypothetical protein | |||
| 15255 | patatin-like phospholipase family protein | |||
| 15260 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20916II |
| 15265 | Rrf2 family transcriptional regulator | |||
| 16940 | class B sortase | |||
| 16945 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20916ORF16945P |
| 16950 | 872 aa hypothetical protein | |||
| 17025 | 383 aa hypothetical protein | |||
| 17030 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi20916III |
| 17035 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M2.Cdi20916IIIP |
| 17040 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11525 | AAA family ATPase | |||
| 11530 | R | Pdi30McrCP (100% identity) | Cdi20916McrCP | |
| 11535 | R | Pdi30McrBP (100% identity) | Cdi20916McrBP | |
| 11540 | cell division protein | |||