Clostridioides difficile 20476 |
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Putative Clostridioides difficile 20476 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,155,533 bp
GenBank #: PZQY00000000 (NZ_PZQY00000000)
REBASE acronym: Cdi20476
Org_num: 36151
All begin DA415_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16350 | DUF262 domain-containing protein | |||
| 16355 | R | CdiS0253ORF15190P (100% identity) | GAANNNNNNCTG | Cdi20476IIP |
| 16360 | 142 aa hypothetical protein | |||
| 16365 | nucleotidyltransferase domain-containing | |||
| 16370 | S | S.Cdo002III (100% identity) | GAANNNNNNCTG | S.Cdi20476II |
| 16375 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi20476II |
| 16380 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | cell wall hydrolase | |||
| 110 | M | M.Cdi21269ORFAP (100% identity) | M.Cdi20476ORF110P | |
| 115 | CopY family transcriptional regulator | |||
| 2870 | 73 aa hypothetical protein | |||
| 2875 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi20476IIIP | |
| 2880 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi20476III |
| 2885 | 224 aa hypothetical protein | |||
| 14435 | patatin-like phospholipase family protein | |||
| 14440 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20476I |
| 14445 | Rrf2 family transcriptional regulator | |||
| 16775 | caspase family protein | |||
| 16780 | M | M.Cdo002V (97% identity) | GGNCC | M.Cdi20476ORF16780P |
| 16785 | R | CdiS0253ORF15585P (100% identity) | GGNCC | Cdi20476ORF16780P |
| 16790 | 92 aa hypothetical protein | |||
| 16835 | 1523 aa hypothetical protein | |||
| 16840 | R | M.Cdo002II (49% identity) | GATC | Cdi20476IVP |
| 16845 | M | M.Cdo002II (49% identity) | GATC | M.Cdi20476IV |
| 16850 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10920 | AAA family ATPase | |||
| 10925 | R | Cdo002McrCP (100% identity) | Cdi20476McrCP | |
| 10930 | R | Pdi6602McrBP (100% identity) | Cdi20476McrBP | |
| 10935 | cell division protein | |||