Clostridioides difficile 20911 |
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Putative Clostridioides difficile 20911 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,146,187 bp
GenBank #: PZOW00000000 (NZ_PZOW00000000)
REBASE acronym: Cdi20911
Org_num: 36164
All begin DA412_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15820 | DUF262 domain-containing protein | |||
| 15825 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi20911ORF15850P |
| 15830 | 142 aa hypothetical protein | |||
| 15835 | nucleotidyltransferase domain-containing | |||
| 15840 | 102 aa hypothetical protein | |||
| 15845 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi20911ORF15850P |
| 15850 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi20911ORF15850P |
| 15855 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2615 | 73 aa hypothetical protein | |||
| 2620 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi20911ORF2620P | |
| 2625 | N-6 DNA methylase | |||
| 2620 | XRE family transcriptional regulator | |||
| 2625 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi20911ORF2625P |
| 2630 | 224 aa hypothetical protein | |||
| 14480 | patatin-like phospholipase family protein | |||
| 14485 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20911ORF14485P |
| 14490 | Rrf2 family transcriptional regulator | |||
| 16230 | LytTR family transcriptional regulator | |||
| 16235 | M | M.CdiST42DndCP (100% identity) | M.Cdi20911DndCP | |
| 16240 | DNA sulfur modification protein DndD | |||
| 16235 | DNA phosphorothioation system sulfurtransferase | |||
| 16240 | M | M.CdiST42DndDP (100% identity) | M.Cdi20911DndDP | |
| 16245 | DUF1832 domain-containing protein | |||
| 16240 | DNA sulfur modification protein DndD | |||
| 16245 | M | M.CdiCd24DndEP (100% identity) | M.Cdi20911DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 16245 | DUF1832 domain-containing protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi20911DptHP | |
| 16260 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 16260 | R | CdiST42DptGP (100% identity) | Cdi20911DptGP | |
| 16265 | DNA phosphorothioation-dependent restriction | |||
| 16260 | DNA phosphorothioation-dependent restriction | |||
| 16265 | R | CdiST42DptFP (100% identity) | Cdi20911DptFP | |
| 16270 | 90 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10715 | AAA family ATPase | |||
| 10720 | R | Cdo002McrCP (100% identity) | Cdi20911McrCP | |
| 10725 | R | Pdi6602McrBP (100% identity) | Cdi20911McrBP | |
| 10730 | cell division protein | |||