Clostridioides difficile 20700 |
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Putative Clostridioides difficile 20700 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,103,613 bp
GenBank #: PZOV00000000 (NZ_PZOV00000000)
REBASE acronym: Cdi20700
Org_num: 36160
All begin DA401_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15980 | DUF262 domain-containing protein | |||
| 15985 | R | CdiS0253ORF15190P (100% identity) | GAANNNNNNCTG | Cdi20700IIP |
| 15990 | 142 aa hypothetical protein | |||
| 15995 | nucleotidyltransferase domain-containing | |||
| 16000 | S | S.Cdo002III (100% identity) | GAANNNNNNCTG | S.Cdi20700II |
| 16005 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi20700II |
| 16010 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 100 | N-acetylmuramoyl-L-alanine amidase | |||
| 105 | M | M.Cdo002ORFAP (100% identity) | M.Cdi20700ORF105P | |
| 110 | CopY family transcriptional regulator | |||
| 2865 | 73 aa hypothetical protein | |||
| 2870 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi20700ORF2870P | |
| 2875 | N-6 DNA methylase | |||
| 2870 | XRE family transcriptional regulator | |||
| 2875 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi20700III |
| 2880 | 224 aa hypothetical protein | |||
| 14430 | patatin-like phospholipase family protein | |||
| 14435 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20700I |
| 14440 | Rrf2 family transcriptional regulator | |||
| 16405 | caspase family protein | |||
| 16410 | M | M.Cdo002V (97% identity) | GGNCC | M.Cdi20700ORF16410P |
| 16415 | R | CdiS0253ORF15585P (100% identity) | GGNCC | Cdi20700ORF16410P |
| 16420 | 92 aa hypothetical protein | |||
| 16465 | 1523 aa hypothetical protein | |||
| 16470 | R | M.Cdo002II (49% identity) | GATC | Cdi20700IVP |
| 16475 | M | M.Cdo002II (49% identity) | GATC | M.Cdi20700IV |
| 16480 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10915 | AAA family ATPase | |||
| 10920 | R | Cdo002McrCP (100% identity) | Cdi20700McrCP | |
| 10925 | R | Pdi6602McrBP (100% identity) | Cdi20700McrBP | |
| 10930 | cell division protein | |||