Clostridioides difficile 21024 |
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Putative Clostridioides difficile 21024 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,136,145 bp
GenBank #: PZOT00000000 (NZ_PZOT00000000)
REBASE acronym: Cdi21024
Org_num: 35932
All begin DA403_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3250 | ketose-bisphosphate aldolase | |||
| 3255 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi21024II |
| 3260 | S | S.Cdo002III (100% identity) | GAANNNNNNCTG | S.Cdi21024II |
| 3265 | nucleotidyltransferase domain-containing | |||
| 3270 | 142 aa hypothetical protein | |||
| 3275 | R | CdiS0253ORF15190P (100% identity) | GAANNNNNNCTG | Cdi21024IIP |
| 3280 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18975 | N-acetylmuramoyl-L-alanine amidase | |||
| 18980 | M | M.Cdo002ORFAP (100% identity) | M.Cdi21024ORF18980P | |
| 18985 | CopY family transcriptional regulator | |||
| 2780 | 115 aa hypothetical protein | |||
| 2785 | M | M.Cdo002II (49% identity) | GATC | M.Cdi21024IV |
| 2790 | R | M.Cdo002II (49% identity) | GATC | Cdi21024IVP |
| 2795 | 1523 aa hypothetical protein | |||
| 2840 | 92 aa hypothetical protein | |||
| 2845 | R | CdiS0253ORF15585P (100% identity) | GGNCC | Cdi21024ORF2850P |
| 2850 | M | M.Cdo002V (97% identity) | GGNCC | M.Cdi21024ORF2850P |
| 2855 | caspase family protein | |||
| 4820 | Rrf2 family transcriptional regulator | |||
| 4825 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi21024I |
| 4830 | patatin-like phospholipase family protein | |||
| 16370 | 224 aa hypothetical protein | |||
| 16375 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi21024III |
| 16380 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi21024IIIP | |
| 16385 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8325 | cell division protein | |||
| 8330 | R | Pdi6602McrBP (100% identity) | Cdi21024McrBP | |
| 8335 | R | Cdo002McrCP (100% identity) | Cdi21024McrCP | |
| 8340 | AAA family ATPase | |||