Clostridioides difficile 020472 |
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Putative Clostridioides difficile 020472 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,306,519 bp
GenBank #: PZON00000000 (NZ_PZON00000000)
REBASE acronym: Cdi20472
Org_num: 36147
All begin DA409_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16660 | DUF262 domain-containing protein | |||
| 16665 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | Cdi20472IVP |
| 16670 | 142 aa hypothetical protein | |||
| 16675 | nucleotidyltransferase domain-containing | |||
| 16680 | 102 aa hypothetical protein | |||
| 16685 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.Cdi20472IV |
| 16690 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.Cdi20472IV |
| 16695 | ketose-bisphosphate aldolase | |||
| 17215 | 111 aa hypothetical protein | |||
| 17220 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi20472IP |
| 17225 | 423 aa hypothetical protein | |||
| 17230 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi20472I |
| 17235 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi20472I |
| 17240 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | 38 aa hypothetical protein | |||
| 1825 | M | M.Pdi30ORF7740P (100% identity) | M.Cdi20472ORF1825P | |
| 1830 | 73 aa hypothetical protein | |||
| 8425 | 39 aa hypothetical protein | |||
| 8430 | M | M.CdiS0352ORF4245P (100% identity) | M.Cdi20472ORF8430P | |
| 8435 | 39 aa hypothetical protein | |||
| 15370 | patatin-like phospholipase family protein | |||
| 15375 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20472II |
| 15380 | Rrf2 family transcriptional regulator | |||
| 17055 | class B sortase | |||
| 17060 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20472ORF17060P |
| 17065 | 872 aa hypothetical protein | |||
| 17140 | 383 aa hypothetical protein | |||
| 17145 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi20472III |
| 17150 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M2.Cdi20472IIIP |
| 17155 | recombinase family protein | |||
| 18100 | RusA family crossover junction | |||
| 18105 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.Cdi20472ORF18105P |
| 18110 | 37 aa hypothetical protein | |||
| 18150 | 69 aa hypothetical protein | |||
| 18155 | M | M.Cdi22aORF16900P (100% identity) | M.Cdi20472ORF18155P | |
| 18160 | 91 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11455 | AAA family ATPase | |||
| 11460 | R | Pdi30McrCP (100% identity) | Cdi20472McrCP | |
| 11465 | R | Pdi30McrBP (100% identity) | Cdi20472McrBP | |
| 11470 | cell division protein | |||