Prolixibacteraceae bacterium WC007 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Prolixibacteraceae bacterium WC007 RM systems
Ref: Zheng,R.K. and Sun,C.M. unpublished
REBASE ref # 29235
Complete sequence: 7,811,310 bp
GenBank #: CP046401
REBASE acronym: PbaWC007
Org_num: 38620
All begin GM418_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25395 | transposase | |||
| 25400 | M | M.TmeT7ORF23610P (34% identity) | M.PbaWC007ORF25400P | |
| 25405 | DDE transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 435 | 67 aa hypothetical protein | |||
| 440 | RM | RM1.MrusP2ORF8290P (36% identity) | PbaWC007ORF440P | |
| 445 | helicase | |||
| 10585 | 111 aa hypothetical protein | |||
| 10590 | M | M.Alu1504ORF7350P (69% identity) | M.PbaWC007ORF10590P | |
| 10595 | 73 aa hypothetical protein | |||
| 14505 | 76 aa hypothetical protein | |||
| 14510 | M | M.Bnu80ORF3410P (38% identity) | M.PbaWC007ORF14510P | |
| 14515 | site-specific DNA-methyltransferase | |||
| 21135 | DUF3945 domain-containing protein | |||
| 21140 | M | M.PbaWC007ORF30135P (82% identity) | M.PbaWC007ORF21140P | |
| 21145 | plasmid mobilization relaxosome protein MobC | |||
| 30130 | plasmid mobilization relaxosome protein MobC | |||
| 30135 | M | M.PbaWC007ORF21140P (82% identity) | M.PbaWC007ORF30135P | |
| 30140 | DUF3945 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14510 | Dam family site-specific | |||
| 14515 | M | M.Bco4102ORF3949P (41% identity) | M1.PbaWC007ORF14515P | |
| 14520 | helix-turn-helix domain-containing protein | |||
| 14525 | M | M.Asp5912ORF16215P (51% identity) | M2.PbaWC007ORF14515P | |
| 14530 | R | Mba171ORF1429P (78% identity) | PbaWC007ORF14515P | |
| 14535 | ATP-dependent helicase | |||
| 20115 | ATP-binding protein | |||
| 20120 | R | AmaHL49ORFBP (71% identity) | PbaWC007ORF20130P | |
| 20125 | 108 aa hypothetical protein | |||
| 20130 | M | M.NmaS108ORF2110P (61% identity) | M.PbaWC007ORF20130P | |
| 20135 | 344 aa hypothetical protein | |||