Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS015054 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS015054 RM systems
Ref: Walker,M. and Clark,C. unpublished
REBASE ref # 29152
| Sequence length: | GenBank #: | |
| Chromosome: | 4,786,287 bp | CP037877 |
| plasmid pPNCS015054_S2: | 247,701 bp | CP037875 |
| plasmid pPNCS015054_S3: | 96,545 bp | CP037876 |
REBASE acronym: Sen15054
Org_num: 36187
All begin E1966_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25465 | endoribonuclease SymE | |||
| 25470 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen15054ORF25475P |
| 25475 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen15054ORF25475P |
| 25480 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen15054ORF25475P |
| 25485 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12260 | drug/metabolite exporter YedA | |||
| 12265 | V | very short patch repair endonuclease | V.Sen15054DcmP | |
| 12270 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen15054DcmP |
| 12275 | phosphohydrolase | |||
| 12515 | RusA family crossover junction | |||
| 12520 | M | M.StyUK1V (100% identity) | GATC | M.Sen15054ORF12520P |
| 12525 | PerC family transcriptional regulator | |||
| 19590 | DNA-binding transcriptional regulator Fis | |||
| 19595 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen15054ORF19595P |
| 19600 | DUF2556 domain-containing protein | |||
| 20085 | ribulose-phosphate 3-epimerase | |||
| 20090 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen15054DamP |
| 20095 | cell division protein DamX | |||
| 25310 | ATP-binding protein | |||
| 25315 | RM | StyUK1IV (100% identity) | GATCAG | Sen15054ORF25315P |
| 25320 | BREX system P-loop protein BrxC | |||
| plasmid pPNCS015054_S2 | ||||
| 205 | thermonuclease family protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.Sen15054ORF210P | |
| 215 | 56 aa hypothetical protein | |||
| 1010 | 273 aa hypothetical protein | |||
| 1015 | M | M.Ype21801ORF197P (100% identity) | M.Sen15054ORF1015P | |
| 1020 | DNA-binding protein | |||
| plasmid pPNCS015054_S3 | ||||
| 1670 | 73 aa hypothetical protein | |||
| 1675 | M | M.StyUK1ORFAP (100% identity) | M.Sen15054ORF1675P | |
| 1680 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3825 | MFS transporter | |||
| 3830 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen15054ORF3830P |
| 3835 | R | SenSW37ORF16990P (100% identity) | CAGAG | Sen15054ORF3830P |
| 3840 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25480 | type I restriction-modification system | |||
| 25485 | R | StyUK1MrrP (100% identity) | Sen15054MrrP | |
| 25490 | BrnT family toxin | |||