Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS014854 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS014854 RM systems
Ref: Walker,M. and Clark,C. unpublished
REBASE ref # 29152
| Sequence length: | GenBank #: | |
| Chromosome: | 4,817,234 bp | CP037874 |
| plasmid pPNCS014854_S1: | 93,844 bp | CP037873 |
REBASE acronym: Sen14854
Org_num: 36184
All begin E1965_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24245 | endoribonuclease SymE | |||
| 24250 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen14854ORF24255P |
| 24255 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen14854ORF24255P |
| 24260 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen14854ORF24255P |
| 24265 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10825 | drug/metabolite exporter YedA | |||
| 10830 | V | very short patch repair endonuclease | V.Sen14854DcmP | |
| 10835 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen14854DcmP |
| 10840 | phosphohydrolase | |||
| 11080 | RusA family crossover junction | |||
| 11085 | M | M.StyUK1V (100% identity) | GATC | M.Sen14854ORF11085P |
| 11090 | PerC family transcriptional regulator | |||
| 18375 | DNA-binding transcriptional regulator Fis | |||
| 18380 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen14854ORF18380P |
| 18385 | DUF2556 domain-containing protein | |||
| 18870 | ribulose-phosphate 3-epimerase | |||
| 18875 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen14854DamP |
| 18880 | cell division protein DamX | |||
| 24090 | ATP-binding protein | |||
| 24095 | RM | StyUK1IV (100% identity) | GATCAG | Sen14854ORF24095P |
| 24100 | BREX system P-loop protein BrxC | |||
| plasmid pPNCS014854_S1 | ||||
| 275 | 62 aa hypothetical protein | |||
| 280 | M | M.StyUK1ORFAP (100% identity) | M.Sen14854ORF280P | |
| 285 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2415 | MFS transporter | |||
| 2420 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen14854ORF2420P |
| 2425 | R | SenSW37ORF16990P (100% identity) | CAGAG | Sen14854ORF2420P |
| 2430 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24260 | type I restriction-modification system | |||
| 24265 | R | StyUK1MrrP (100% identity) | Sen14854MrrP | |
| 24270 | BrnT family toxin | |||