Clavibacter michiganensis subsp. nebraskensis HF4 |
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Putative Clavibacter michiganensis subsp. nebraskensis HF4 RM systems
Ref: Huguet-Tapia,J.C. et al. unpublished
REBASE ref # 29652
Complete sequence: 3,064,293 bp
GenBank #: CP033721
REBASE acronym: CmiHF4
Org_num: 37622
All begin EGX36_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2195 | DEAD/DEAH box helicase | |||
| 2200 | M | M.CmiSL1ORF437P (100% identity) | M.CmiHF4ORF2200P | |
| 2205 | DUF4190 domain-containing protein | |||
| 9640 | 185 aa hypothetical protein | |||
| 9645 | V | V.CmiA6096ORF14685P (100% identity) | V.CmiHF4ORF9655P | |
| 9650 | R | CmiA6096ORF14685P (100% identity) | CmiHF4ORF9655P | |
| 9655 | M | M.CmiA6096ORF14685P (100% identity) | M.CmiHF4ORF9655P | |
| 9665 | 179 aa hypothetical protein | |||
| 10905 | 182 aa hypothetical protein | |||
| 10910 | M | M.CmiSL1ORF2180P (100% identity) | M.CmiHF4ORF10910P | |
| 10915 | 454 aa hypothetical protein | |||
| 13095 | DNA-binding response regulator | |||
| 13100 | RM | CmiSL1ORF2619P (100% identity) | CmiHF4ORF13100P | |
| 13105 | M | M.CmiSL1ORF2620P (100% identity) | M.CmiHF4ORF13100P | |
| 13110 | 34 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10910 | site-specific DNA-methyltransferase | |||
| 10915 | R | Cmi7580McrCP (100% identity) | CmiHF4McrCP | |
| 10920 | R | CmiSL1McrBP (100% identity) | CmiHF4McrBP | |
| 10925 | recombinase family protein | |||