Lactobacillus paragasseri NCK1347 |
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Putative Lactobacillus paragasseri NCK1347 RM systems
Ref: Pan,M. unpublished
REBASE ref # 29820
Complete sequence: 1,944,204 bp
GenBank #: CP043924
REBASE acronym: Lpa1347
Org_num: 38160
All begin F2Y32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5075 | AAA family ATPase | |||
| 5080 | S | S.Lac13720ORF1103P (89% identity) | S.Lpa1347ORF5085P | |
| 5085 | M | M.Lpa18ORF4720P (100% identity) | M.Lpa1347ORF5085P | |
| 5090 | R | Lpa18ORF4720P (100% identity) | Lpa1347ORF5085P | |
| 5095 | DUF3800 domain-containing protein | |||
| 6985 | beta-lactamase family protein | |||
| 6990 | R | Lpa18ORF7770P (100% identity) | Lpa1347ORF7015P | |
| 6995 | S | S3.Lpa18ORF7770P (100% identity) | S3.Lpa1347ORF7015P | |
| 7000 | tyrosine-type recombinase/integrase | |||
| 7005 | S | S2.Lpa18ORF7770P (100% identity) | S2.Lpa1347ORF7015P | |
| 7010 | S | S1.Lpa18ORF7770P (100% identity) | S1.Lpa1347ORF7015P | |
| 7015 | M | M.Lpa18ORF7770P (100% identity) | M.Lpa1347ORF7015P | |
| 7020 | Dam family site-specific | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7015 | SAM-dependent DNA methyltransferase | |||
| 7020 | M | M.Lpa18ORF7775P (100% identity) | M.Lpa1347ORF7020P | |
| 7025 | R | Lpa18ORF7775P (100% identity) | Lpa1347ORF7020P | |
| 7030 | 332 aa hypothetical protein | |||
| 7110 | P27 family phage terminase small subunit | |||
| 7115 | M | M.Lpa18ORF7870P (100% identity) | M.Lpa1347ORF7115P | |
| 7120 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 185 | exodeoxyribonuclease III | |||
| 190 | R | Lpa9ORF390P (100% identity) | Lpa1347ORF190P | |
| 195 | alpha/beta hydrolase | |||
| 5045 | ATP-binding protein | |||
| 5050 | R | Lpa18MrrP (100% identity) | Lpa1347MrrP | |
| 5055 | FMN-binding protein | |||