Vibrio parahaemolyticus 19-021-D1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio parahaemolyticus 19-021-D1 RM systems
Ref: Han,J.E. and Kim,J.H. unpublished
REBASE ref # 30082
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,577,848 bp | CP046411 |
| chromosome 2: | 1,814,246 bp | CP046412 |
| plasmid pVp_Kor-D1-2: | 68,848 bp | CP046414 |
REBASE acronym: Vpa021D1
Org_num: 39061
All begin GNY17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7700 | tyrosine-type recombinase/integrase | |||
| 7705 | M | M.Vpa82E4ORF3360P (100% identity) | M.Vpa021D1ORF7705P | |
| 7710 | AAA family ATPase | |||
| 7715 | S | S.Vna82A3ORF10305P (100% identity) | S.Vpa021D1ORF7705P | |
| 7720 | R | Vpa82E4ORF3360P (100% identity) | Vpa021D1ORF7705P | |
| 7725 | DUF2787 domain-containing protein | |||
| 9230 | DUF45 domain-containing protein | |||
| 9235 | R | Vpa82E4ORF16820P (100% identity) | Vpa021D1ORF11720P | |
| 9240 | AAA family ATPase | |||
| 9245 | S | S1.Vpa82E4ORF16820P (100% identity) | S.Vpa021D1ORF11720P | |
| 9250 | M | M2.Vpa82E4ORF16820P (100% identity) | M.Vpa021D1ORF11720P | |
| 9255 | restriction endonuclease subunit S | |||
| 9275 | 127 aa hypothetical protein | |||
| 9280 | M | M.Vpa82E4ORF1875P (100% identity) | M.Vpa021D1ORF9280P | |
| 9285 | S | S.VpaSM4II (100% identity) | S.Vpa021D1ORF9280P | |
| 9290 | 331 aa hypothetical protein | |||
| 11745 | 127 aa hypothetical protein | |||
| 11750 | M | M.Vpa82E4ORF16790P (100% identity) | M.Vpa021D1ORF11750P | |
| 11755 | S | S.Vpa82E4ORF16790P (100% identity) | S.Vpa021D1ORF11750P | |
| 11760 | R | Vpa82E4ORF16790P (100% identity) | Vpa021D1ORF11750P | |
| 11765 | 97 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2480 | 84 aa hypothetical protein | |||
| 2485 | M | M.Vpa82E4ORF8310P (100% identity) | M.Vpa021D1ORF2485P | |
| 2490 | 790 aa hypothetical protein | |||
| 13435 | AAA family ATPase | |||
| 13440 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa021D1DamP |
| 13445 | ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 23215 | 90 aa hypothetical protein | |||
| 23220 | M | M.Vpa82E4ORF22855P (100% identity) | M.Vpa021D1ORF23220P | |
| 23225 | 759 aa hypothetical protein | |||
| plasmid pVp_Kor-D1-2 | ||||
| 27470 | 366 aa hypothetical protein | |||
| 27475 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa021D1ORF27475P | |
| 27480 | IS5 family transposase | |||