Salmonella enterica FDAARGOS_688 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica FDAARGOS_688 RM systems
Ref: Fashae,K. et al. unpublished
REBASE ref # 29149
Complete sequence: 4,575,198 bp
GenBank #: CP046280
REBASE acronym: SenS688
Org_num: 36172
All begin FOB96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13490 | transposase | |||
| 13495 | M | M.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | M.SenS688ORF13495P |
| 13500 | S | S.Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | S.SenS688ORF13495P |
| 13505 | R | Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | SenS688ORF13495P |
| 13510 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4520 | DUF2732 family protein | |||
| 4525 | M | M.Sen9948ORF3210P (96% identity) | M.SenS688ORF4525P | |
| 4530 | replication endonuclease | |||
| 10100 | drug/metabolite exporter YedA | |||
| 10105 | V | V.StyUK1DcmP (100% identity) | V.SenS688DcmP | |
| 10110 | M | M.SenRM074DcmP (100% identity) | CCWGG | M.SenS688DcmP |
| 10115 | phosphohydrolase | |||
| 16680 | DNA-binding transcriptional regulator Fis | |||
| 16685 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS688ORF16685P |
| 16690 | DUF2556 domain-containing protein | |||
| 17170 | ribulose-phosphate 3-epimerase | |||
| 17175 | M | M.StyTDamP (100% identity) | GATC | M.SenS688DamP |
| 17180 | cell division protein DamX | |||
| 21890 | AAA family ATPase | |||
| 21895 | RM | Sen9787III (100% identity) | ACRCAG | SenS688ORF21895P |
| 21900 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2110 | MFS transporter | |||
| 2115 | M | M.Sen59887ORF21055P (100% identity) | CAGAG | M.SenS688ORF2115P |
| 2120 | R | Sen59887ORF21055P (100% identity) | CAGAG | SenS688ORF2115P |
| 2125 | 33 aa hypothetical protein | |||