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Putative Glaesserella parasuis SCW0912 RM systems
Ref: Zhang,P. and Wang,Y. unpublished
REBASE ref # 29049
Complete sequence: 2,349,014 bp
GenBank #: CP046114
REBASE acronym: Gpa912
Org_num: 35742
All begin GJV39_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
85 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
90 | M | M.HpaNagORF1654P (100% identity) | GTANNNNNNNCTTG | M.Gpa912II |
95 | 163 aa hypothetical protein | |||
100 | ATP-binding protein | |||
105 | R | HpaNagORF1654P (100% identity) | GTANNNNNNNCTTG | Gpa912IIP |
110 | S | S.HpaNNII (100% identity) | GTANNNNNNNCTTG | S.Gpa912II |
115 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
1100 | 71 aa hypothetical protein | |||
1105 | R | HpaNagORF1802P (100% identity) | Gpa912ORF1135P | |
1110 | 145 aa hypothetical protein | |||
1115 | DUF1829 domain-containing protein | |||
1120 | S | S2.HpaNagORF1802P (100% identity) | S3.Gpa912ORF1135P | |
1125 | S | S.HpaSH03ORF10045P (48% identity) | S2.Gpa912ORF1135P | |
1130 | AAA family ATPase | |||
1135 | M | M.HpaNagORF1802P (100% identity) | M.Gpa912ORF1135P | |
1140 | 137 aa hypothetical protein | |||
4260 | apolipoprotein N-acyltransferase | |||
4265 | R | HpaNagORF693P (100% identity) | AAGNNNNNNTCC | Gpa912IIIP |
4270 | AAA family ATPase | |||
4275 | S | S.Hpa1401ORF9595P (62% identity) | AAGNNNNNNTCC | S.Gpa912III |
4280 | M | M.HpaNagORF693P (100% identity) | AAGNNNNNNTCC | M.Gpa912III |
4285 | RNA polymerase sigma factor RpoE | |||
6530 | histidinol-phosphate transaminase | |||
6535 | R | HpaNagORF319P (100% identity) | Gpa912ORF6545P | |
6540 | S | S.HpaNNORF6450P (100% identity) | S.Gpa912ORF6545P | |
6545 | M | M.HpaNNORF6450P (100% identity) | M.Gpa912ORF6545P | |
6550 | 3-phosphoserine/phosphohydroxythreonine | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
865 | cell filamentation protein Fic | |||
870 | S | S1.HpaNNORF865P (100% identity) | S2.Gpa912ORF880P | |
875 | S | S2.HpaNNORF865P (100% identity) | S1.Gpa912ORF880P | |
880 | RM | HpaNagORF1545P (100% identity) | Gpa912ORF880P | |
885 | DUF4143 domain-containing protein | |||
3395 | aspartate-semialdehyde dehydrogenase | |||
3400 | M | HpaNagORF863P (100% identity) | M.Gpa912ORF3400P | |
3405 | 141 aa hypothetical protein | |||
3900 | peptide chain release factor 1 | |||
3905 | M | M.HpaSH03ORF2165P (98% identity) | GCGC | M.Gpa912ORF3905P |
3910 | R | HpaNagORF782P (100% identity) | Gpa912ORF3905P | |
3915 | peptide chain release factor N(5)-glutamine | |||
6980 | 199 aa hypothetical protein | |||
6985 | M | M.GpaHPS1ORF5345P (100% identity) | M.Gpa912ORF6985P | |
6990 | chromosome partition protein MukE | |||
8365 | 3-dehydroquinate synthase | |||
8370 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa912I |
8375 | sodium-dependent transporter | |||
9175 | flavodoxin-dependent | |||
9180 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa912ORF9180P | |
9185 | R | HpaST41ORF8905P (100% identity) | Gpa912ORF9180P | |
9190 | 2-hydroxyacid dehydrogenase | |||
10120 | 134 aa hypothetical protein | |||
10125 | M | M1.HpaSH03ORF7930P (100% identity) | M1.Gpa912ORF10125P | |
10130 | M | M2.HpaSH03ORF7930P (100% identity) | M2.Gpa912ORF10125P | |
10135 | RM | HpaSH03ORF7930P (100% identity) | Gpa912ORF10125P | |
10140 | DUF4411 family protein | |||
10295 | 86 aa hypothetical protein | |||
10300 | M | M.HpaNagORF1948P (100% identity) | M.Gpa912ORF10300P | |
10305 | enoyl-CoA hydratase | |||
10670 | 86 aa hypothetical protein | |||
10675 | M | M.HpaNNORF10520P (82% identity) | M.Gpa912ORF10675P | |
10680 | enoyl-CoA hydratase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1405 | ketol-acid reductoisomerase | |||
??? | M | M.GpaHF57ORF830P (99% identity) | M.Gpa912ORF1410P | |
1420 | R | HpaNagORF1223P (100% identity) | Gpa912ORF1410P | |
1425 | Fic family protein | |||
11155 | 49 aa hypothetical protein | |||
11160 | M | M.HpaST41ORF1100P (100% identity) | M.Gpa912ORF11160P | |
11165 | R | HpaST41ORF1100P (100% identity) | Gpa912ORF11160P | |
11170 | IS1595 family transposase |