Streptococcus suis isolate GD-0088 |
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Putative Streptococcus suis isolate GD-0088 RM systems
Ref: Van Der Putten CL,B. unpublished
REBASE ref # 30036
Complete sequence: 2,292,626 bp
GenBank #: LR738723
REBASE acronym: Ssu0088
Org_num: 38901
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu0088ORFDP |
| ??? | M | M.Ssu12ORF649P (99% identity) | CCAANNNNNNTTC | M.Ssu0088ORFDP |
| ??? | R | SsuSs109ORF1830BP (93% identity) | CCAANNNNNNTTC | Ssu0088ORFDBP |
| ??? | R | SsuiS10ORFCP (70% identity) | CCAANNNNNNTTC | Ssu0088ORFDAP |
| ??? | S | S2.SsuWTORFAP (100% identity) | CCAANNNNNNTTC | S1.Ssu0088ORFHP |
| ??? | S | S1.SsuWTORFAP (99% identity) | S2.Ssu0088ORFHP | |
| ??? | M | M.SsuWTORFAP (100% identity) | M.Ssu0088ORFHP | |
| ??? | R | SsuNLS50ORF3680P (100% identity) | Ssu0088ORFHP | |
| ??? | M | M.SsuWTORFDP (100% identity) | M.Ssu0088ORFCP | |
| ??? | S | S.SsuiS10ORFAP (50% identity) | S1.Ssu0088ORFCP | |
| ??? | R | SsuNLS50ORF9390P (100% identity) | Ssu0088ORFCP | |
| ??? | 200 aa hypothetical protein SSU98_1796 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.SsuWTORFFP (100% identity) | M.Ssu0088ORFGP | |
| ??? | M | M.SsuSs109ORF5180P (99% identity) | M.Ssu0088ORFFP | |
| ??? | M | M.SsuNLS50ORF6180P (100% identity) | M.Ssu0088ORFBP | |
| ??? | S | S.SsuSs109ORF2140P (98% identity) | S.Ssu0088ORFEP | |
| ??? | RM | SsuSs109ORF2140P (100% identity) | Ssu0088ORFEP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | SsuSs109ORF1705P (100% identity) | Ssu0088ORFAP | |
| ??? | M | M.SsuWTORFCP (100% identity) | M.Ssu0088ORFAP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | SsuWTMcrCP (100% identity) | Ssu0088McrCP | |
| ??? | R | SsuWTMcrBP (100% identity) | Ssu0088McrBP | |