Salmonella enterica subsp. enterica serovar Kentucky 162835 |
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Putative Salmonella enterica subsp. enterica serovar Kentucky 162835 RM systems
Ref: Cohen,E. et al. Environ. Microbiol. (2019) In press
REBASE ref # 29153
Complete sequence: 4,851,336 bp
GenBank #: CP043667
REBASE acronym: Sen162835
Org_num: 36190
All begin F1B87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20060 | 322 aa hypothetical protein | |||
| 20065 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | Sen162835ORF20070P |
| 20070 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.Sen162835ORF20070P |
| 20075 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.Sen162835ORF20070P |
| 20080 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | cell division protein DamX | |||
| 1925 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen162835DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 domain-containing protein | |||
| 2410 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen162835ORF2410P |
| 2415 | tyrosine-type recombinase/integrase | |||
| 3420 | DUF2732 family protein | |||
| 3425 | M | M.SenUA39ORF1528P (100% identity) | M.Sen162835ORF3425P | |
| 3430 | replication endonuclease | |||
| 9740 | phosphohydrolase | |||
| 9745 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen162835DcmP |
| 9750 | V | very short patch repair endonuclease | V.Sen162835DcmP | |
| 9755 | drug/metabolite exporter YedA | |||
| 20200 | YebC/PmpR family DNA-binding transcriptional | |||
| 20205 | R | SspA292ORF20185P (100% identity) | Sen162835ORF20205P | |
| 20210 | malate transporter | |||
| 20240 | BREX system P-loop protein BrxC | |||
| 20245 | RM | SspA292ORF20215P (100% identity) | GAANCAG | Sen162835ORF20245P |
| 20250 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17665 | 33 aa hypothetical protein | |||
| 17670 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen162835ORF17675P |
| 17675 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.Sen162835ORF17675P |
| 17680 | MFS transporter | |||