Salmonella enterica subsp. enterica serovar Typhimurium AUSMDU00008979 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium AUSMDU00008979 RM systems
Ref: Baines,S.L. et al. unpublished
REBASE ref # 29032
| Sequence length: | GenBank #: | |
| Chromosome: | 5,022,086 bp | CP045952 |
| plasmid pAUSMDU00008979_01: | 144,821 bp | CP045953 |
REBASE acronym: Sen8979
Org_num: 35727
All begin GJE10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21435 | restriction endonuclease | |||
| 21440 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen8979ORF21445P |
| 21445 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8979ORF21445P |
| 21450 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8979ORF21445P |
| 21455 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.StyTDamP (100% identity) | GATC | M.Sen8979DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 domain-containing protein | |||
| 2345 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8979ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 3265 | DUF2732 family protein | |||
| 3270 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen8979ORF3270P | |
| 3275 | replication endonuclease | |||
| 6345 | ead/Ea22-like family protein | |||
| 6350 | M | M.StyTORF1914P (100% identity) | M.Sen8979ORF6350P | |
| 6355 | 92 aa hypothetical protein | |||
| 10065 | PerC family transcriptional regulator | |||
| 10070 | M | M.Ssp17155ORFIP (100% identity) | M.Sen8979ORF10070P | |
| 10075 | RusA family crossover junction | |||
| 10340 | phosphohydrolase | |||
| 10345 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8979DcmP |
| 10350 | V | V.StyUK1DcmP (100% identity) | V.Sen8979DcmP | |
| 10355 | drug/metabolite exporter YedA | |||
| 21605 | BREX system P-loop protein BrxC | |||
| 21610 | RM | StyUK1IV (100% identity) | GATCAG | Sen8979ORF21610P |
| 21615 | AAA family ATPase | |||
| plasmid pAUSMDU00008979_01 | ||||
| 25620 | 102 aa hypothetical protein | |||
| 25625 | M | M.SenST46ORF25580P (100% identity) | M.Sen8979ORF25625P | |
| 25630 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18820 | 33 aa hypothetical protein | |||
| 18825 | R | StyUK1IP (99% identity) | CAGAG | Sen8979ORF18830P |
| 18830 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8979ORF18830P |
| 18835 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21430 | BrnT family toxin | |||
| 21435 | R | StyUK1MrrP (100% identity) | Sen8979MrrP | |
| 21440 | type I restriction-modification system | |||