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Putative Xylella fastidiosa subsp. fastidiosa Bakersfield-1 RM systems
Ref: Burbank,L.P. et al. Plant Dis., PDIS05191126RE (2019) In press
REBASE ref # 29532
Complete sequence: 2,537,329 bp
GenBank #: CP040799
REBASE acronym: XfaB1
Org_num: 37374
All begin FG899_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1305 | M48 family metallopeptidase | |||
12150 | R | Xfav13ORF1230P (100% identity) | XfaB1ORF1340P | |
??? | S | S.Xfav13ORF1230P (100% identity) | S.XfaB1ORF1340P | |
1340 | M | M.Xfav13ORF1230P (100% identity) | M.XfaB1ORF1340P | |
1345 | 68 aa hypothetical protein | |||
11595 | restriction endonuclease subunit S | |||
??? | M | type I restriction-modification methylase | GATCNNNNNNNTGC | M1.XfaB1ORF11600P |
11610 | R | type I restriction endonuclease subunit R | GATCNNNNNNNTGC | XfaB1ORF11600P |
11615 | S | restriction endonuclease subunit S | GATCNNNNNNNTGC | S.XfaB1ORF11600P |
11620 | 88 aa hypothetical protein | |||
11625 | M | type I restriction-modification system subunit | GATCNNNNNNNTGC | M2.XfaB1ORF11600P |
11630 | LysE family translocator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3305 | response regulator | |||
3310 | M | M.Xfav13ORF3100P (100% identity) | M.XfaB1ORF3310P | |
3315 | R | R1.Xfav13ORF3100P (100% identity) | XfaB1ORF3310P | |
3320 | DUF262 domain-containing protein | |||
6005 | DNA replication protein DnaD | |||
??? | M | M.Xfav13ORF5610P (100% identity) | M.XfaB1ORF6010P | |
6015 | Ax21 family protein | |||
7475 | lysozyme | |||
7480 | M | M.Xfav13ORF7095P (100% identity) | M.XfaB1ORF7480P | |
12255 | 51 aa hypothetical protein | |||
7555 | low molecular weight phosphotyrosine protein | |||
7560 | M | M.Xfav13ORF7170P (100% identity) | M.XfaB1ORF7560P | |
7565 | type II toxin-antitoxin system RelE/ParE family | |||
12295 | 135 aa hypothetical protein | |||
9035 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.XfaB1ORF9035P |
9040 | R | Xfav25ORF3130P (100% identity) | TTCGAA | XfaB1ORF9035P |
9045 | 69 aa hypothetical protein | |||
9250 | DNA primase | |||
9255 | R | Xfav13ORF8800P (100% identity) | XfaB1ORF9260P | |
??? | M | M.Xfav13ORF8800P (100% identity) | M.XfaB1ORF9260P | |
9270 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4705 | 3-oxoacyl-ACP synthase III | |||
4710 | M | M.Xfav13ORF4440P (100% identity) | M.XfaB1ORF4710P | |
4715 | 72 aa hypothetical protein | |||
4720 | R | Xfav13ORF4440P (100% identity) | XfaB1ORF4710P | |
4725 | alpha/beta fold hydrolase |