Escherichia coli INSC1001 |
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Putative Escherichia coli INSC1001 RM systems
Ref: Fiddes,I. and Church,D. unpublished
REBASE ref # 29314
Complete sequence: 4,630,646 bp
GenBank #: CP045978
REBASE acronym: Eco1001
Org_num: 36733
All begin GI528_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22070 | endoribonuclease SymE | |||
| 22075 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco1001ORF22080P |
| 22080 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco1001ORF22080P |
| 22085 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco1001ORF22080P |
| 22090 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10055 | drug/metabolite exporter YedA | |||
| 10060 | V | V.SflFF64DcmP (100% identity) | V.Eco1001DcmP | |
| 10065 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1001DcmP |
| 10070 | phosphohydrolase | |||
| 16555 | DNA-binding transcriptional regulator Fis | |||
| 16560 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1001ORF16560P |
| 16565 | DUF2556 domain-containing protein | |||
| 17180 | ribulose-phosphate 3-epimerase | |||
| 17185 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1001DamP |
| 17190 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5860 | site-specific DNA recombinase | |||
| 5865 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco1001ORF5865P |
| 5870 | isocitrate dehydrogenase | |||
| 22055 | 906 aa hypothetical protein | |||
| 22060 | R | SenHNK130McrCP (100% identity) | Eco1001McrCP | |
| 22065 | R | SenHNK130McrBP (100% identity) | Eco1001McrBP | |
| 22070 | endoribonuclease SymE | |||
| 22085 | type I restriction-modification system | |||
| 22090 | R | SenHNK130MrrP (100% identity) | Eco1001MrrP | |
| 22095 | GTPase | |||