Salmonella enterica subsp. enterica serovar Heidelberg 41578 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg 41578 RM systems
Ref: Mafiz,A. et al. unpublished
REBASE ref # 29023
| Sequence length: | GenBank #: | |
| Chromosome: | 4,794,364 bp | CP045762 |
| plasmid p1CFSAN000318: | 117,406 bp | CP045763 |
REBASE acronym: Sen41578
Org_num: 35703
All begin GH765_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3530 | endoribonuclease SymE | |||
| 3535 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen41578ORF3540P |
| 3540 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen41578ORF3540P |
| 3545 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen41578ORF3540P |
| 3550 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | DEAD/DEAH box helicase | |||
| 3380 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen41578ORF3380P |
| 3400 | fosfomycin resistance glutathione transferase | |||
| 3405 | R | Sens12373ORF19550P (100% identity) | Sen41578ORF3405P | |
| 3410 | YebC/PmpR family DNA-binding transcriptional | |||
| 9175 | DUF4060 family protein | |||
| 9180 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen41578ORF9180P |
| 9185 | exonuclease | |||
| 14250 | drug/metabolite exporter YedA | |||
| 14255 | V | V.StyTDcmP (100% identity) | V.Sen41578DcmP | |
| 14260 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen41578DcmP |
| 14265 | phosphohydrolase | |||
| 20945 | DNA-binding transcriptional regulator Fis | |||
| 20950 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen41578ORF20950P |
| 20955 | DUF2556 domain-containing protein | |||
| 21435 | ribulose-phosphate 3-epimerase | |||
| 21440 | M | M.StyTDamP (100% identity) | GATC | M.Sen41578DamP |
| 21445 | cell division protein DamX | |||
| plasmid p1CFSAN000318 | ||||
| 23315 | IS1 family transposase | |||
| ??? | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Sen41578ORF23320P |
| 23325 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen41578ORF23320P |
| 23330 | IS6-like element IS26 family transposase | |||
| 23475 | 101 aa hypothetical protein | |||
| 23480 | M | M.SspPIBORF23080P (100% identity) | M.Sen41578ORF23480P | |
| 23485 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6095 | MFS transporter | |||
| 6100 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen41578ORF6100P |
| 6105 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen41578ORF6100P |
| 6110 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3545 | type I restriction-modification system | |||
| 3550 | R | StyUK1MrrP (100% identity) | Sen41578MrrP | |
| 3555 | BrnT family toxin | |||