Escherichia coli HNK130 |
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Putative Escherichia coli HNK130 RM systems
Ref: Zhang,L. et al. unpublished
REBASE ref # 29154
| Sequence length: | GenBank #: | |
| Chromosome: | 4,581,492 bp | CP045741 |
| plasmid pTHNK130-1: | 180,783 bp | CP045742 |
REBASE acronym: EcoHNK130
Org_num: 36732
All begin GHR40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | Mrr restriction system protein | |||
| 1700 | R | SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | EcoHNK130ORF1705P |
| 1705 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoHNK130ORF1705P |
| 1710 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoHNK130ORF1705P |
| 1715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6615 | cell division protein DamX | |||
| 6620 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHNK130DamP |
| 6625 | ribulose-phosphate 3-epimerase | |||
| 7240 | DUF2556 domain-containing protein | |||
| 7245 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoHNK130ORF7245P |
| 7250 | DNA-binding transcriptional regulator Fis | |||
| 13705 | phosphohydrolase | |||
| 13710 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoHNK130DcmP |
| 13715 | V | V.SflFF64DcmP (100% identity) | V.EcoHNK130DcmP | |
| 13720 | drug/metabolite exporter YedA | |||
| 17660 | DUF1317 family protein | |||
| 17665 | M | M.SenHNK130ORF1185P (100% identity) | M.EcoHNK130ORF17665P | |
| 17670 | DUF4060 family protein | |||
| plasmid pTHNK130-1 | ||||
| 22695 | 100 aa hypothetical protein | |||
| 22700 | M | M.SenHNK130ORF185P (100% identity) | M.EcoHNK130ORF22700P | |
| 22705 | 158 aa hypothetical protein | |||
| 23125 | 101 aa hypothetical protein | |||
| 23130 | M | M.EcoSCU204ORF26105P (100% identity) | M.EcoHNK130ORF23130P | |
| 23135 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | GTPase | |||
| 1695 | R | SenHNK130MrrP (100% identity) | EcoHNK130MrrP | |
| 1700 | type I restriction-modification system | |||
| 1715 | endoribonuclease SymE | |||
| 1720 | R | SenHNK130McrBP (100% identity) | EcoHNK130McrBP | |
| 1725 | R | SenHNK130McrCP (100% identity) | EcoHNK130McrCP | |
| 1730 | 906 aa hypothetical protein | |||
| 18190 | isocitrate dehydrogenase | |||
| 18195 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoHNK130ORF18195P |
| 18200 | site-specific DNA recombinase | |||