Ref: Negi,Y. et al. unpublished

REBASE ref # 29597

Complete sequence: 7,013,200 bp

GenBank #: CP034058

REBASE acronym: AspYBS01

Org_num: 37534

 

All begin EH233_

Type I
ORF Gene Most similar Specificity Name
 
1300 ATP-binding protein
1305 R type I restriction endonuclease subunit R AspYBS01ORF1325P
1310 DUF3368 domain-containing protein
1315 UPF0175 family protein
1320 S S.AvrORFAP (1% identity) S.AspYBS01ORF1325P
1325 M SAM-dependent DNA methyltransferase M.AspYBS01ORF1325P
1330 XRE family transcriptional regulator
 
13325 MerR family transcriptional regulator
13330 M SAM-dependent DNA methyltransferase M.AspYBS01ORF13330P
13335 S restriction endonuclease subunit S S.AspYBS01ORF13330P
13340 transcriptional regulator
13345 R HsdR family type I site-specific AspYBS01ORF13330P
13350 M48 family peptidase
 
24550 AbrB/MazE/SpoVT family DNA-binding
24555 R DEAD/DEAH box helicase AspYBS01ORF24565P
24560 330 aa hypothetical protein
24565 M M.AvrORFBP (1% identity) M.AspYBS01ORF24565P
24570 86 aa hypothetical protein
24575 type II toxin-antitoxin system VapC family
24580 72 aa hypothetical protein
24585 S restriction endonuclease subunit S S.AspYBS01ORF24565P
24590 DUF4325 domain-containing protein
Type II
ORF Gene Most similar Specificity Name
 
4195 anthranilate phosphoribosyltransferase
4200 M DNA adenine methylase M.AspYBS01ORF4200P
4205 cytochrome b/b6 domain-containing protein
 
4665 DUF697 domain-containing protein
4670 M DNA cytosine methyltransferase M.AspYBS01ORF4670P
4675 deoxyribose-phosphate aldolase
 
13070 cyanase
13075 M site-specific DNA-methyltransferase M.AspYBS01ORF13075P
13080 70 aa hypothetical protein
 
13615 DUF427 domain-containing protein
13620 M DNA adenine methylase GATC M.AspYBS01ORF13620P
13625 DUF751 family protein
 
14515 ASCH domain-containing protein
14520 M DNA cytosine methyltransferase M.AspYBS01ORF14520P
14525 DUF1392 domain-containing protein
 
14835 GNAT family N-acetyltransferase
14840 RM class I SAM-dependent DNA methyltransferase AspYBS01ORF14840P
14845 ATPase
 
14880 195 aa hypothetical protein
14885 M DNA cytosine methyltransferase M.AspYBS01ORF14885P
14890 DEAD/DEAH box helicase
 
17680 IS200/IS605 family transposase
17685 RM class I SAM-dependent DNA methyltransferase AspYBS01ORF17685P
17690 helicase
 
19090 M42 family peptidase
19095 M M.AvrORFCP (1% identity) M.AspYBS01ORF19095P
19100 R AvaBORF3181P (1% identity) CYCGRG AspYBS01ORF19095P
19110 DUF3493 domain-containing protein
 
20850 methyltransferase
20855 M DNA cytosine methyltransferase CGATCG M.AspYBS01ORF20855P
20860 Uma2 family endonuclease
 
23210 DGQHR domain-containing protein
23215 M DNA phosphorothioation system sulfurtransferase M.AspYBS01DndCP
23220 DNA sulfur modification protein DndD
 
23215 DNA phosphorothioation system sulfurtransferase
23220 M DNA sulfur modification protein DndD M.AspYBS01DndDP
23225 DNA sulfur modification protein DndE
 
23220 DNA sulfur modification protein DndD
23225 M DNA sulfur modification protein DndE M.AspYBS01DndEP
23230 tetratricopeptide repeat protein
 
23460 urea ABC transporter substrate-binding protein
23465 M 778 aa hypothetical protein M.AspYBS01ORF23465P
23470 signal recognition particle protein
 
24825 type 2 isopentenyl-diphosphate Delta-isomerase
24830 S restriction endonuclease subunit S S.AspYBS01ORF24835P
24835 RM type I restriction endonuclease subunit M AspYBS01ORF24835P
24840 65 aa hypothetical protein
 
27650 Uma2 family endonuclease
27655 M DUF1156 domain-containing protein M.AspYBS01ORF27655P
27660 DUF3883 domain-containing protein
Type IV
ORF Gene Most similar Specificity Name
 
16895 72 aa hypothetical protein
16900 R restriction endonuclease AspYBS01MrrP
16905 KAP P-loop domain protein