Thiomonas species Bio17B3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thiomonas species Bio17B3 RM systems
Ref: William,W. unpublished
REBASE ref # 29492
| Sequence length: | GenBank #: | |
| chromosome BIO17B3: | 3,874,064 bp | LR131947 |
| plasmid pC-BIO17B3: | 204,717 bp | LR131948 |
REBASE acronym: Tsp17B3
Org_num: 38975
All begin BIO17B3_, BIO17B3_PC
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome BIO17B3 | ||||
| 40021 | peptidase family M4 | |||
| 40022 | M | M.TspOC7ORF30888P (100% identity) | M.Tsp17B3ORF40022P | |
| 40023 | IS3 family transposase | |||
| 50004 | conserved protein of unknown function | |||
| 50005 | R | TspOC7ORF30901P (100% identity) | Tsp17B3ORF50003P | |
| 50006 | conserved protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome BIO17B3 | ||||
| 10629 | conserved protein of unknown function | |||
| 10630 | RM | TspOC7ORF10625P (100% identity) | Tsp17B3ORF10630P | |
| 10631 | protein of unknown function | |||
| 10668 | lipoprotein pcp | |||
| 10669 | RM | TspCB2ORF110022P (100% identity) | Tsp17B3ORF10669P | |
| 10670 | Integration host factor (IHF) | |||
| 50470 | Transcriptional regulator, AbrB family | |||
| 50471 | RM | TspOC7ORF31371P (100% identity) | Tsp17B3ORF50471P | |
| 50473 | TraB family protein | |||
| 50559 | protein of unknown function | |||
| 50560 | M | M.TspOC7ORF31459P (100% identity) | M.Tsp17B3ORF50560P | |
| 50561 | protein of unknown function | |||
| 50909 | Integration host factor subunit beta | |||
| 50910 | RM | TspOC7ORF31810P (100% identity) | Tsp17B3ORF50910P | |
| 50911 | Type IV secretory pathway, protease | |||
| plasmid pC-BIO17B3 | ||||
| 48 | protein of unknown function | |||
| 49 | M | M.Tsp16B3ORF202P (100% identity) | M.Tsp17B3ORF49P | |
| 50 | protein of unknown function | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome BIO17B3 | ||||
| 30100 | phage-associated protein | |||
| 30101 | M | M.TspOC7ORF30516P (100% identity) | M.Tsp17B3ORF30101P | |
| 30102 | R | TspOC7ORF30516AP (100% identity) | Tsp17B3ORF30101AP | |
| 30103 | transposase | |||
| 30104 | R | TspOC7ORF30516BP (100% identity) | Tsp17B3ORF30101BP | |
| 30105 | protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome BIO17B3 | ||||
| 11452 | aspartyl-tRNA synthetase | |||
| 11453 | R | TspOC7MrrP (100% identity) | Tsp17B3MrrP | |
| 11454 | 3-deoxy-D-arabino-heptulosonate-7-phosphate | |||
| 11973 | conserved protein of unknown function | |||
| 11974 | R | TspOC7McrBP (100% identity) | Tsp17B3McrBP | |
| 11975 | R | TspOC7McrCP (100% identity) | Tsp17B3McrCP | |
| 11976 | transposase (fragment) | |||