Escherichia coli MA11 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MA11 RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,460,921 bp | CP040314 |
| plasmid pO157: | 95,631 bp | CP040315 |
REBASE acronym: EcoMA11
Org_num: 36748
All begin FEL10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3260 | endoribonuclease SymE | |||
| 3265 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoMA11ORF3270P |
| 3270 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoMA11ORF3270P |
| 3275 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoMA11ORF3270P |
| 3280 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoMA11ORF1695P | |
| 1705 | Eae protein | |||
| 2905 | DUF4102 domain-containing protein | |||
| 2910 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoMA11ORF2920P |
| 2915 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoMA11ORF2920P |
| 2920 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoMA11ORF2920P |
| 2925 | 87 aa hypothetical protein | |||
| 2995 | transposase | |||
| 3000 | R | Ecos1613ORF26795P (100% identity) | EcoMA11ORF3000P | |
| 3005 | N-acetylneuraminate epimerase | |||
| 3035 | DEAD/DEAH box helicase | |||
| 3040 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoMA11ORF3040P |
| 4985 | PerC family transcriptional regulator | |||
| 4990 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoMA11ORF4990P |
| 4995 | LexA family transcriptional regulator | |||
| 12410 | TrmB family transcriptional regulator | |||
| 12415 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoMA11ORF12415P | |
| 12430 | 61 aa hypothetical protein | |||
| 14430 | DUF1737 domain-containing protein | |||
| 14435 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoMA11ORF14435P | |
| 14440 | TrmB family transcriptional regulator | |||
| 16590 | DUF1737 domain-containing protein | |||
| 16600 | M | M.EcoTWORF1742P (100% identity) | M.EcoMA11ORF16600P | |
| 16605 | TrmB family transcriptional regulator | |||
| 17350 | drug/metabolite exporter YedA | |||
| 17355 | V | V.EcosPA8DcmP (100% identity) | V.EcoMA11DcmP | |
| 17360 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoMA11DcmP |
| 17365 | phosphohydrolase | |||
| 24845 | DNA-binding transcriptional regulator Fis | |||
| 24850 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoMA11ORF24850P |
| 24855 | DUF2556 domain-containing protein | |||
| 25380 | ribulose-phosphate 3-epimerase | |||
| 25385 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMA11DamP |
| 25390 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 28060 | 101 aa hypothetical protein | |||
| 28065 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoMA11ORF28065P | |
| 28070 | 73 aa hypothetical protein | |||