Escherichia coli F1 E4 |
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Putative Escherichia coli F1 E4 RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,496,151 bp | CP040307 |
| plasmid pO157: | 95,642 bp | CP040308 |
REBASE acronym: EcoF1E4
Org_num: 36721
All begin FEL01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3240 | endoribonuclease SymE | |||
| 3245 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF1E4ORF3250P |
| 3250 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF1E4ORF3250P |
| 3255 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF1E4ORF3250P |
| 3260 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoF1E4ORF1675P | |
| 1685 | Eae protein | |||
| 2885 | DUF4102 domain-containing protein | |||
| 2890 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoF1E4ORF2900P |
| 2895 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoF1E4ORF2900P |
| 2900 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoF1E4ORF2900P |
| 2905 | 87 aa hypothetical protein | |||
| 2975 | transposase | |||
| 2980 | R | Ecos1613ORF26795P (100% identity) | EcoF1E4ORF2980P | |
| 2985 | N-acetylneuraminate epimerase | |||
| 3015 | DEAD/DEAH box helicase | |||
| 3020 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF1E4ORF3020P |
| 4955 | PerC family transcriptional regulator | |||
| 4960 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoF1E4ORF4960P |
| 4965 | LexA family transcriptional regulator | |||
| 12390 | TrmB family transcriptional regulator | |||
| 12395 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF1E4ORF12395P | |
| 12410 | 61 aa hypothetical protein | |||
| 12785 | TrmB family transcriptional regulator | |||
| 12790 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoF1E4ORF12790P | |
| 12795 | DUF1737 domain-containing protein | |||
| 17675 | drug/metabolite exporter YedA | |||
| 17680 | V | V.EcosPA8DcmP (100% identity) | V.EcoF1E4DcmP | |
| 17685 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF1E4DcmP |
| 17690 | phosphohydrolase | |||
| 25095 | DNA-binding transcriptional regulator Fis | |||
| 25100 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF1E4ORF25100P |
| 25105 | DUF2556 domain-containing protein | |||
| 25630 | ribulose-phosphate 3-epimerase | |||
| 25635 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF1E4DamP |
| 25640 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 28310 | 101 aa hypothetical protein | |||
| 28315 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF1E4ORF28315P | |
| 28320 | 73 aa hypothetical protein | |||