Escherichia coli HB6 |
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Putative Escherichia coli HB6 RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,539,892 bp | CP040305 |
| plasmid pO157: | 95,621 bp | CP040306 |
REBASE acronym: EcoHB6
Org_num: 36731
All begin FEL06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3240 | endoribonuclease SymE | |||
| 3245 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoHB6ORF3250P |
| 3250 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoHB6ORF3250P |
| 3255 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoHB6ORF3250P |
| 3260 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoHB6ORF1675P | |
| 1685 | Eae protein | |||
| 2885 | DUF4102 domain-containing protein | |||
| 2890 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoHB6ORF2900P |
| 2895 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoHB6ORF2900P |
| 2900 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoHB6ORF2900P |
| 2905 | 87 aa hypothetical protein | |||
| 2975 | transposase | |||
| 2980 | R | Ecos1613ORF26795P (100% identity) | EcoHB6ORF2980P | |
| 2985 | N-acetylneuraminate epimerase | |||
| 3015 | DEAD/DEAH box helicase | |||
| 3020 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoHB6ORF3020P |
| 4955 | PerC family transcriptional regulator | |||
| 4960 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoHB6ORF4960P |
| 4965 | LexA family transcriptional regulator | |||
| 9800 | phosphohydrolase | |||
| 9805 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoHB6DcmP |
| 9810 | V | V.EcosPA8DcmP (100% identity) | V.EcoHB6DcmP | |
| 9815 | drug/metabolite exporter YedA | |||
| 14515 | DUF1737 domain-containing protein | |||
| 14520 | M | M.EcoPSUO103ORF8840P (100% identity) | M.EcoHB6ORF14520P | |
| 14525 | TrmB family transcriptional regulator | |||
| 15755 | DUF1737 domain-containing protein | |||
| 15760 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoHB6ORF15760P | |
| 15765 | TrmB family transcriptional regulator | |||
| 18525 | NinE family protein | |||
| 18530 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoHB6ORF18530P |
| 18535 | recombination protein NinB | |||
| 25475 | DNA-binding transcriptional regulator Fis | |||
| 25480 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoHB6ORF25480P |
| 25485 | DUF2556 domain-containing protein | |||
| 26010 | ribulose-phosphate 3-epimerase | |||
| 26015 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHB6DamP |
| 26020 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 28690 | 101 aa hypothetical protein | |||
| 28695 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoHB6ORF28695P | |
| 28700 | 73 aa hypothetical protein | |||