Vibrio species THAF100 |
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Putative Vibrio species THAF100 RM systems
Ref: Ruckert,C. et al. unpublished
REBASE ref # 29242
| Sequence length: | GenBank #: | |
| Chromosome: | 3,138,671 bp | CP045350 |
| plasmid pTHAF100_a: | 1,317,907 bp | CP045351 |
| plasmid pTHAF100_c: | 4,831 bp | CP045353 |
REBASE acronym: VspF100
Org_num: 39086
All begin FIV01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3235 | DNA-binding transcriptional regulator | |||
| 3240 | M | M.Vna16371ORF3110P (94% identity) | M.VspF100ORF3240P | |
| 3245 | S | S.SspML198ORF12715P (59% identity) | S.VspF100ORF3240P | |
| 3250 | R | VpaMVP9ORF14630P (89% identity) | VspF100ORF3240P | |
| 3255 | Endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 655 | 555 aa hypothetical protein | |||
| 660 | M | M.Vca25920ORF1350P (90% identity) | M.VspF100ORF660P | |
| 665 | R | AmaQZ99ORF3235P (45% identity) | VspF100ORF660P | |
| 670 | 296 aa hypothetical protein | |||
| 1160 | 497 aa hypothetical protein | |||
| 1165 | M | M.Vpe19642ORFBP (91% identity) | M.VspF100DamP | |
| 1170 | Ribulose-phosphate 3-epimerase | |||
| plasmid pTHAF100_a | ||||
| 15080 | GMP reductase | |||
| 15085 | M | M.SspYLB08ORF3315P (65% identity) | M.VspF100ORF15085P | |
| 15090 | R | SspYLB08ORF3315P (60% identity) | VspF100ORF15085P | |
| 15095 | 199 aa hypothetical protein | |||
| plasmid pTHAF100_c | ||||
| 20830 | M | M.Vci207081ORFFP (86% identity) | M.VspF100ORF20830P | |
| 20835 | 120 aa hypothetical protein | |||
| 20840 | 108 aa hypothetical protein | |||
| 20845 | 62 aa hypothetical protein | |||
| 20850 | 61 aa hypothetical protein | |||
| 20855 | Helix-turn-helix protein | |||
| ??? | R | Vci207081ORFFP (88% identity) | VspF100ORF20830P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2075 | 85 aa hypothetical protein | |||
| 2080 | M | M.Xve53MORF17725P (70% identity) | M.VspF100ORF2080P | |
| 2085 | R | Vpa107ORF3101P (90% identity) | VspF100ORF2080P | |
| 2090 | 151 aa hypothetical protein | |||