Citrobacter species NMI7904_11 |
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Putative Citrobacter species NMI7904_11 RM systems
Ref: Goncalves Ribeiro,T. et al. unpublished
REBASE ref # 29453
| Sequence length: | GenBank #: | |
| Chromosome: | 5,445,431 bp | CP045205 |
| plasmid pCTEL-1: | 113,742 bp | CP045204 |
| plasmid pCTEL-2: | 235,057 bp | CP045203 |
REBASE acronym: Csp411
Org_num: 37155
All begin GBC03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7930 | DUF4263 domain-containing protein | |||
| 7935 | R | Eta9ORF3750P (98% identity) | Csp411ORF7955P | |
| 7940 | FRG domain-containing protein | |||
| 7945 | S | S.EasWA007ORF20020P (95% identity) | S.Csp411ORF7955P | |
| 7950 | IS630-like element ISEc33 family transposase | |||
| 7955 | M | M.EasWA007ORF20020P (97% identity) | M.Csp411ORF7955P | |
| 7960 | TIR domain-containing protein | |||
| 12180 | 402 aa hypothetical protein | |||
| 12185 | R | EcoW12E19ORF23680P (100% identity) | Csp411ORF12190P | |
| 12190 | M | M.EcoW12E19ORF23680P (100% identity) | M.Csp411ORF12190P | |
| 12195 | S | S.EcoW12E19ORF23680P (100% identity) | S1.Csp411ORF12190P | |
| 12200 | IS5-like element ISKpn26 family transposase | |||
| 12205 | glycosyltransferase | |||
| 12210 | glycosyltransferase | |||
| 12215 | sulfatase-like hydrolase/transferase | |||
| 12220 | bifunctional phosphoribosyl-AMP | |||
| 12225 | imidazole glycerol phosphate synthase subunit | |||
| 12230 | S | S.Cfr181ORF24140P (34% identity) | S2.Csp411ORF12190P | |
| 12235 | IS1 family transposase | |||
| 12240 | S | S.Cfr181ORF24140P (21% identity) | S3.Csp411ORF12190P | |
| 12245 | nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2560 | ribulose-phosphate 3-epimerase | |||
| 2565 | M | M.CamY19DamP (98% identity) | GATC | M.Csp411DamP |
| 2570 | cell division protein DamX | |||
| 5535 | 70 aa hypothetical protein | |||
| 5540 | M | M.SenK61ORFCP (99% identity) | M.Csp411ORF5540P | |
| 5545 | 59 aa hypothetical protein | |||
| 10425 | TraR/DksA family transcriptional regulator | |||
| 10430 | M | M.Cfr691ORFMP (87% identity) | M.Csp411ORF10430P | |
| 10435 | replication endonuclease | |||
| 10985 | 85 aa hypothetical protein | |||
| 10990 | M | M.Csp86ORF1751P (99% identity) | M.Csp411ORF10990P | |
| 10995 | DinI-like family protein | |||
| 11025 | structural protein | |||
| 11030 | M | M.Cam165ORF9120P (100% identity) | M.Csp411ORF11030P | |
| 11035 | 93 aa hypothetical protein | |||
| 12300 | TraR/DksA family transcriptional regulator | |||
| 12305 | M | M.EclC1431ORF24700P (98% identity) | M.Csp411ORF12305P | |
| 12310 | 71 aa hypothetical protein | |||
| 14475 | transposase | |||
| 14480 | M | M.Ssp60ORF16560P (100% identity) | M.Csp411ORF14480P | |
| 14485 | 925 aa hypothetical protein | |||
| 14665 | HTH-type transcriptional regulator Cbl | |||
| 14670 | M | M.PcaDPMP6ORF17410P (100% identity) | M.Csp411ORF14670P | |
| 14675 | ATP-binding protein | |||
| 14870 | phosphohydrolase | |||
| 14875 | M | M.CamY19DcmP (96% identity) | CCWGG | M.Csp411DcmP |
| 14880 | V | V.CamY19DcmP (95% identity) | V.Csp411DcmP | |
| 14885 | drug/metabolite exporter YedA | |||
| 17475 | IS3 family transposase | |||
| 17480 | M | M.YpsF1ORFCP (100% identity) | M.Csp411ORF17480P | |
| 17485 | nuclease | |||
| 27335 | IS66 family transposase | |||
| 27340 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Csp411ORF27340P |
| 27345 | DEAD/DEAH box helicase | |||
| 28525 | DNA-binding transcriptional regulator Fis | |||
| 28530 | M | M.CamY19ORF17925P (95% identity) | ATGCAT | M.Csp411ORF28530P |
| 28535 | DUF2556 domain-containing protein | |||
| plasmid pCTEL-1 | ||||
| 1875 | 64 aa hypothetical protein | |||
| 1880 | M | M.Eko2020ORF26220P (100% identity) | M.Csp411ORF1880P | |
| 1885 | 73 aa hypothetical protein | |||
| plasmid pCTEL-2 | ||||
| 1350 | DNA polymerase III subunit beta | |||
| 1355 | M | M.Sen3039ORF24445P (100% identity) | M.Csp411ORF1355P | |
| 1360 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27515 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 27520 | M | M.Sen5006ORF16245P (100% identity) | M.Csp411ORF27520P | |
| 27525 | R | SenLASSORF19350P (100% identity) | Csp411ORF27520P | |
| 27530 | inovirus Gp2 family protein | |||