Alloprevotella species E39 |
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Putative Alloprevotella species E39 RM systems
Ref: Na,S.W. unpublished
REBASE ref # 29594
Complete sequence: 2,920,169 bp
GenBank #: CP033459
REBASE acronym: AspE39
Org_num: 37529
All begin C7Y71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3640 | DUF262 domain-containing protein | |||
| 3645 | R | Pbr921IP (83% identity) | AspE39ORF3665P | |
| 3650 | 843 aa hypothetical protein | |||
| 3655 | S | S.Rin31NBORF2860P (57% identity) | S1.AspE39ORF3665P | |
| 3660 | S | S1.Pbr921IP (85% identity) | S2.AspE39ORF3665P | |
| 3665 | M | M.Pbr921I (95% identity) | M.AspE39ORF3665P | |
| 3670 | 373 aa hypothetical protein | |||
| 4135 | sel1 repeat family protein | |||
| 4140 | S | S1.PspE133IIP (75% identity) | S.AspE39ORF4140P | |
| 4145 | 183 aa hypothetical protein | |||
| 6965 | 377 aa hypothetical protein | |||
| 6970 | R | Pdi150ORF11280P (80% identity) | AspE39ORF6975P | |
| 6975 | M | M.Mba108610ORFMP (75% identity) | M.AspE39ORF6975P | |
| 6980 | S | S3.PbrTC11ORF12030P (55% identity) | S1.AspE39ORF6975P | |
| 6985 | S | S1.Bfr310ORF8575P (67% identity) | S2.AspE39ORF6975P | |
| 6990 | integrase | |||
| 6995 | S | S3.Pin2837ORF2930P (73% identity) | S3.AspE39ORF6975P | |
| 7000 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | 80 aa hypothetical protein | |||
| 200 | M | M.AspE39ORF8530P (93% identity) | M.AspE39ORF200P | |
| 205 | thymidylate synthase | |||
| 6180 | dUTP diphosphatase | |||
| 6185 | M | M1.Cma49459ORF898P (35% identity) | M.AspE39ORF6185P | |
| 6190 | IS30 family transposase | |||
| 7095 | ribonuclease H | |||
| 7100 | M | M.PjiNM7ORF4201P (60% identity) | M.AspE39ORF7100P | |
| 7105 | arginine--tRNA ligase | |||
| 8525 | thymidylate synthase | |||
| 8530 | M | M.AspE39ORF200P (93% identity) | M.AspE39ORF8530P | |
| 8535 | 80 aa hypothetical protein | |||
| 8970 | transposase | |||
| 8975 | R | Pdo3716YORF10795P (62% identity) | AspE39ORF8975P | |
| 8980 | DNA methyltransferase | |||
| 8975 | DUF262 domain-containing protein | |||
| 8980 | M | M.AmuAK32ORF10280P (51% identity) | M.AspE39ORF8980P | |
| 8985 | biotin/lipoyl-binding protein | |||
| 9370 | 359 aa hypothetical protein | |||
| 9375 | R | Psp1327ORF7235P (85% identity) | AspE39ORF9375P | |
| 9380 | modification methylase | |||
| 9375 | DUF262 domain-containing protein | |||
| 9380 | M | M.PspRep29ORF4300P (65% identity) | M.AspE39ORF9380P | |
| 9385 | 715 aa hypothetical protein | |||
| 11545 | 72 aa hypothetical protein | |||
| 11550 | RM | PmeBin37ORFBP (63% identity) | AspE39ORF11550P | |
| 11555 | IS1380 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4625 | calcium/sodium antiporter | |||
| 4630 | M | M.Bsp7301ORF12560P (61% identity) | M.AspE39ORF4630P | |
| 4635 | R | Oho1ORF5025P (53% identity) | AspE39ORF4630P | |
| 4640 | DUF805 domain-containing protein | |||
| 5850 | 83 aa hypothetical protein | |||
| 5855 | M | M.PspY501ORF8965P (70% identity) | M.AspE39ORF5855P | |
| 5860 | R | Ran421ORF1645P (63% identity) | AspE39ORF5855P | |
| 5865 | cell filamentation protein Fic | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6190 | IS30 family transposase | |||
| 6195 | R | CpiMcrB4P (12% identity) | AspE39McrBP | |
| 6200 | 615 aa hypothetical protein | |||
| 6195 | AAA family ATPase | |||
| 6200 | R | EsaSS1885McrCP (17% identity) | AspE39McrCP | |
| 6205 | dNTP triphosphohydrolase | |||