Deinococcus species AJ005 |
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Putative Deinococcus species AJ005 RM systems
Ref: Lee,P.C. unpublished
REBASE ref # 24200
| Sequence length: | GenBank #: | |
| Chromosome: | 3,380,712 bp | CP044990 |
| plasmid p115k: | 115,048 bp | CP044991 |
| plasmid p17k: | 17,648 bp | CP044988 |
| plasmid p96k: | 96,101 bp | CP044987 |
REBASE acronym: DspAJ005
Org_num: 37647
All begin DAAJ005_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4470 | 222 aa hypothetical protein | |||
| 4475 | M | M.PspSF6ORF27100P (47% identity) | M.DspAJ005ORF4475P | |
| 4480 | S | S.Aap10433I (20% identity) | S.DspAJ005ORF4475P | |
| 4485 | R | AfaJQ135ORF2155P (22% identity) | DspAJ005ORF4475P | |
| 4490 | M48 family metallopeptidase | |||
| 14040 | 313 aa hypothetical protein | |||
| 14045 | R | DgoI0ORF2775P (76% identity) | DspAJ005ORF14085P | |
| 14050 | GIY-YIG nuclease family protein | |||
| 14055 | 85 aa hypothetical protein | |||
| 14060 | macro domain-containing protein | |||
| 14065 | 362 aa hypothetical protein | |||
| 14070 | S | S.AagBL06ORF5767P (46% identity) | S.DspAJ005ORF14085P | |
| 14075 | DUF262 domain-containing protein | |||
| 14080 | 135 aa hypothetical protein | |||
| 14085 | M | M.DgoI0ORF2775P (85% identity) | M.DspAJ005ORF14085P | |
| 14090 | 99 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7255 | IS110 family transposase | |||
| 7260 | RM | DspNW56ORFEAP (48% identity) | DspAJ005ORF7260P | |
| 7265 | RES domain-containing protein | |||
| 14900 | 177 aa hypothetical protein | |||
| 14905 | M | M.MalBG8ORF164P (46% identity) | M.DspAJ005ORF14905P | |
| 14910 | carbamoyl-phosphate synthase large subunit | |||
| 15735 | SLC13 family permease | |||
| 15740 | RM | DrdV (64% identity) | DspAJ005ORF15740P | |
| 15745 | YebC/PmpR family DNA-binding transcriptional | |||
| 15805 | aminomethyl-transferring glycine dehydrogenase | |||
| 15810 | M | M.LspPLM2ORF30080P (6% identity) | M.DspAJ005ORF15810P | |
| 15815 | R | Cth418ORF4465P (29% identity) | DspAJ005ORF15810P | |
| 15820 | PIN domain-containing protein | |||
| 17725 | DNA methyltransferase | |||
| 17730 | M | M.DspRLORF4345P (83% identity) | M.DspAJ005ORF17730P | |
| 17735 | PspC domain-containing protein | |||
| plasmid p115k | ||||
| 18450 | YjgP/YjgQ family permease | |||
| 18455 | RM | DspNW56ORFBP (36% identity) | DspAJ005ORF18455P | |
| 18460 | 99 aa hypothetical protein | |||
| plasmid p96k | ||||
| 215 | 220 aa hypothetical protein | |||
| 220 | R | HauORF528P (21% identity) | DspAJ005ORF225P | |
| 225 | M | M.DswDY59ORF8660P (61% identity) | M.DspAJ005ORF225P | |
| 230 | V | V.Dpe19664ORF1635P (57% identity) | V.DspAJ005ORF225P | |
| 235 | phospholipase | |||
| 245 | helicase | |||
| 250 | RM | McaBCSORFGP (48% identity) | DspAJ005ORF250P | |
| 255 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3040 | polyphosphate kinase 2 family protein | |||
| 3045 | M | M.Dma26562ORF1912P (87% identity) | M.DspAJ005ORF3045P | |
| 3050 | 202 aa hypothetical protein | |||
| plasmid p17k | ||||
| 325 | tyrosine-type recombinase/integrase | |||
| 330 | M | M.Kpn515ORF24345P (57% identity) | M.DspAJ005ORF330P | |
| 335 | R | Ssp1025ORF1155P (45% identity) | DspAJ005ORF330P | |
| 340 | 107 aa hypothetical protein | |||