Leclercia adecarboxylata E1 |
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Putative Leclercia adecarboxylata E1 RM systems
Ref: Phan,H.T.T. et al. unpublished
REBASE ref # 28955
| Sequence length: | GenBank #: | |
| Chromosome: | 4,772,356 bp | CP042505 |
| plasmid pE1_001: | 357,530 bp | CP042506 |
| plasmid pE1_003: | 93,544 bp | CP042508 |
REBASE acronym: LadE1
Org_num: 38194
All begin FR773_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2310 | 62 aa hypothetical protein | |||
| 2315 | S | S.SmaS71ORF2410P (100% identity) | S.LadE1ORF2320P | |
| 2320 | M | M.EhoEhh18ORF2630P (99% identity) | M.LadE1ORF2320P | |
| 2325 | M48 family metallopeptidase | |||
| 2330 | R | SenSmo02ORF2465P (74% identity) | LadE1ORF2320BP | |
| 2335 | IS3 family transposase | |||
| 2340 | R | Ecl73IIP (24% identity) | LadE1ORF2320AP | |
| 2345 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14095 | drug/metabolite exporter YedA | |||
| 14100 | V | V.LspNIH3DcmP (100% identity) | V.LadE1Dcm2P | |
| 14105 | M | M.Lad12375DcmP (100% identity) | M.LadE1Dcm2P | |
| 14110 | phosphohydrolase | |||
| 15680 | IS3 family transposase | |||
| 15685 | RM | Lad198ORF15320P (100% identity) | LadE1ORF15685P | |
| 15690 | ATP-dependent helicase | |||
| 16880 | 61 aa hypothetical protein | |||
| 16885 | RM | CkoK1018ORF19065P (89% identity) | LadE1ORF16885P | |
| 16890 | 60 aa hypothetical protein | |||
| 20780 | ribulose-phosphate 3-epimerase | |||
| 20785 | M | M.LspNIH3Dam (100% identity) | GATC | M.LadE1DamP |
| 20790 | cell division protein DamX | |||
| plasmid pE1_001 | ||||
| 23560 | DUF1173 domain-containing protein | |||
| 23565 | M | M.Ssp15303DcmP (100% identity) | M.LadE1DcmP | |
| 23570 | nuclease | |||
| 24480 | 106 aa hypothetical protein | |||
| 24485 | M | M.Ssp15303ORFDP (100% identity) | M.LadE1ORF24485P | |
| 24490 | 202 aa hypothetical protein | |||
| 24650 | DNA-binding protein | |||
| 24655 | M | M.Ssp15303ORFEP (100% identity) | M.LadE1ORF24655P | |
| 24660 | 284 aa hypothetical protein | |||
| plasmid pE1_003 | ||||
| 25810 | recombination-associated protein RdgC | |||
| 25815 | M | M.LadZ961ORF26835P (83% identity) | M.LadE1ORF25815P | |
| 25820 | Dam family site-specific | |||
| 25815 | site-specific DNA-methyltransferase | |||
| 25820 | M | M.LadZ961ORF26830P (98% identity) | M.LadE1ORF25820P | |
| 25825 | adenylosuccinate synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2390 | aminobutyraldehyde dehydrogenase | |||
| 2395 | R | LadI1McrC2P (100% identity) | LadE1McrCP | |
| 2400 | R | LadE61McrBP (99% identity) | LadE1McrBP | |
| 2405 | 94 aa hypothetical protein | |||